Difference between revisions of "ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN-L-ORNITHINE/P-HYDROXY-PHENYLPYRUVATE//TYR/L-GLUTAMATE GAMMA-SEMIALDEHYDE.73."

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.11.2-RXN 1.14.11.2-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Arginine/Asparagine...")
(Created page with "Category:Gene == Gene Ec-21_005990 == * left end position: ** 6904711 * transcription direction: ** POSITIVE * right end position: ** 6909777 * centisome position: ** 93.5...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.11.2-RXN 1.14.11.2-RXN] ==
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== Gene Ec-21_005990 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 6904711
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* common name:
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* transcription direction:
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** Arginine/Asparagine/Proline hydroxylase
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** POSITIVE
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** Prolyl 4-hydroxylase, alpha subunit
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* right end position:
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* ec number:
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** 6909777
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** [http://enzyme.expasy.org/EC/1.14.11.2 EC-1.14.11.2]
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* centisome position:
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** 93.558266   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0014_0136
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** Esi0014_0136
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ACID-PHOSPHATASE-RXN]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROCOLLAGEN-L-PROLINE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[SUC]][c] '''+''' 1 [[CPD-6321]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 oxygen[c] '''+''' 1 a [procollagen]-L-proline[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 succinate[c] '''+''' 1 a [procollagen] trans 4-hyroxy-L-proline[c] '''+''' 1 CO2[c]
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* Reaction: [[RXN-5822]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-06_004630]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-08_000690]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-23_001510]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-07_006010]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-12_001090]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-12_005020]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-01_007120]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-11_002580]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-06_002940]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-26_000290]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-08_002170]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-24_001040]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-6348]]
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* [[PWY-5083]]
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* [[NADPHOS-DEPHOS-PWY]]
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* [[NAD-BIOSYNTHESIS-II]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=6904711}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03219 R03219]
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{{#set: transcription direction=POSITIVE}}
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* UNIPROT:
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{{#set: right end position=6909777}}
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** [http://www.uniprot.org/uniprot/P21195 P21195]
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{{#set: centisome position=93.558266    }}
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** [http://www.uniprot.org/uniprot/Q10576 Q10576]
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{{#set: common name=Esi_0014_0136|Esi0014_0136}}
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** [http://www.uniprot.org/uniprot/P16924 P16924]
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{{#set: reaction associated=ACID-PHOSPHATASE-RXN|RXN-5822}}
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** [http://www.uniprot.org/uniprot/P13674 P13674]
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{{#set: pathway associated=PWY-6348|PWY-5083|NADPHOS-DEPHOS-PWY|NAD-BIOSYNTHESIS-II}}
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** [http://www.uniprot.org/uniprot/P05307 P05307]
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** [http://www.uniprot.org/uniprot/P09102 P09102]
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** [http://www.uniprot.org/uniprot/P07237 P07237]
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** [http://www.uniprot.org/uniprot/Q922C8 Q922C8]
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** [http://www.uniprot.org/uniprot/P04785 P04785]
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** [http://www.uniprot.org/uniprot/P54001 P54001]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Arginine/Asparagine/Proline hydroxylase}}
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{{#set: common name=Prolyl 4-hydroxylase, alpha subunit}}
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{{#set: ec number=EC-1.14.11.2}}
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{{#set: gene associated=Ec-06_004630|Ec-08_000690|Ec-23_001510|Ec-07_006010|Ec-12_001090|Ec-12_005020|Ec-01_007120|Ec-11_002580|Ec-06_002940|Ec-26_000290|Ec-08_002170|Ec-24_001040}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:29, 21 March 2018

Gene Ec-21_005990

  • left end position:
    • 6904711
  • transcription direction:
    • POSITIVE
  • right end position:
    • 6909777
  • centisome position:
    • 93.558266
  • Synonym(s):
    • Esi_0014_0136
    • Esi0014_0136

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN-L-ORNITHINE/P-HYDROXY-PHENYLPYRUVATE//TYR/L-GLUTAMATE_GAMMA-SEMIALDEHYDE.73.&oldid=19043"