Difference between revisions of "Retinols"

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(Created page with "Category:Gene == Gene Ec-21_006210 == * left end position: ** 7064727 * transcription direction: ** POSITIVE * right end position: ** 7074652 * centisome position: ** 95.7...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11989 RXN-11989] == * direction: ** LEFT-TO-RIGHT * common name: ** Carotenoid oxygenase * ec n...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-21_006210 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11989 RXN-11989] ==
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* left end position:
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* direction:
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** 7064727
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** Carotenoid oxygenase
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* right end position:
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* ec number:
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** 7074652
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** [http://enzyme.expasy.org/EC/1.13.11.59 EC-1.13.11.59]
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* centisome position:
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** 95.72646   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0014_0168
 
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** Esi0014_0168
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ACETATE--COA-LIGASE-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[CPD-7953]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-12935]][c] '''+''' 1 [[PRENAL]][c]
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***ec-number
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* With common name(s):
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== Pathways associated ==
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** 1 torulene[c] '''+''' 1 oxygen[c] '''=>''' 1 4'-apo-β-carotenal[c] '''+''' 1 3-methyl-2-butenal[c]
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* [[PWY66-161]]
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* [[PWY66-21]]
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== Genes associated with this reaction  ==
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* [[PWY66-162]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY0-1313]]
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* Gene: [[Ec-18_002140]]
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* [[PWY-6672]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-7118]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-06_002830]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-06_002810]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-20_002250]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-21_004930]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-6681]], neurosporaxanthin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6681 PWY-6681]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=7064727}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31522 31522]
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{{#set: right end position=7074652}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=95.72646    }}
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{{#set: common name=Carotenoid oxygenase}}
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{{#set: common name=Esi_0014_0168|Esi0014_0168}}
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{{#set: ec number=EC-1.13.11.59}}
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{{#set: reaction associated=ACETATE--COA-LIGASE-RXN}}
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{{#set: gene associated=Ec-18_002140|Ec-06_002830|Ec-06_002810|Ec-20_002250|Ec-21_004930}}
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{{#set: pathway associated=PWY66-161|PWY66-21|PWY66-162|PWY0-1313|PWY-6672|PWY-7118}}
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{{#set: in pathway=PWY-6681}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:30, 21 March 2018

Reaction RXN-11989

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Carotenoid oxygenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 torulene[c] + 1 oxygen[c] => 1 4'-apo-β-carotenal[c] + 1 3-methyl-2-butenal[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6681, neurosporaxanthin biosynthesis: PWY-6681
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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