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Line 1: |
Line 1: |
− | [[Category:Reaction]] | + | [[Category:Pathway]] |
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROTEIN-TYROSINE-PHOSPHATASE-RXN PROTEIN-TYROSINE-PHOSPHATASE-RXN] == | + | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6703 PWY-6703] == |
− | * direction: | + | * taxonomic range: |
− | ** LEFT-TO-RIGHT | + | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] |
| * common name: | | * common name: |
− | ** protein tyrosine phosphatase | + | ** preQ0 biosynthesis |
− | ** Putative tyrosine phosphatase
| + | |
− | ** Dual specificity phosphatase, catalytic domain
| + | |
− | ** Dual specificity phosphatase
| + | |
− | ** Tyrosine/serine-protein phosphatase IphP-type
| + | |
− | * ec number:
| + | |
− | ** [http://enzyme.expasy.org/EC/3.1.3.48 EC-3.1.3.48]
| + | |
| * Synonym(s): | | * Synonym(s): |
| + | ** deazapurine biosynthesis |
| | | |
− | == Reaction Formula == | + | == Reaction(s) found == |
− | * With identifiers:
| + | '''1''' reactions found over '''4''' reactions in the full pathway |
− | ** 1 [[WATER]][c] '''+''' 1 [[Protein-tyrosine-phosphates]][c] '''=>''' 1 [[Protein-Tyrosines]][c] '''+''' 1 [[Pi]][c]
| + | * [[GTP-CYCLOHYDRO-I-RXN]] |
− | * With common name(s):
| + | ** 1 associated gene(s): |
− | ** 1 H2O[c] '''+''' 1 a [protein]-L-tyrosine phosphate[c] '''=>''' 1 a [protein]-L-tyrosine[c] '''+''' 1 phosphate[c]
| + | *** [[Ec-27_007000]] |
− | | + | ** 1 reconstruction source(s) associated: |
− | == Genes associated with this reaction ==
| + | *** [[annotation-esiliculosus_genome]] |
− | Genes have been associated with this reaction based on different elements listed below.
| + | == Reaction(s) not found == |
− | * Gene: [[Ec-06_003660]] | + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-12093 RXN-12093] |
− | ** Source: [[annotation-esiliculosus_genome]]
| + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5507 RXN0-5507] |
− | *** Assignment: AUTOMATED-NAME-MATCH
| + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6575 RXN0-6575] |
− | * Gene: [[Ec-11_005420]]
| + | |
− | ** Source: [[annotation-esiliculosus_genome]] | + | |
− | *** Assignment: AUTOMATED-NAME-MATCH | + | |
− | * Gene: [[Ec-01_010740]]
| + | |
− | ** Source: [[annotation-esiliculosus_genome]] | + | |
− | *** Assignment: AUTOMATED-NAME-MATCH | + | |
− | * Gene: [[Ec-12_001770]]
| + | |
− | ** Source: [[annotation-esiliculosus_genome]]
| + | |
− | *** Assignment: GO-TERM
| + | |
− | * Gene: [[Ec-05_003800]] | + | |
− | ** Source: [[annotation-esiliculosus_genome]]
| + | |
− | *** Assignment: GO-TERM
| + | |
− | * Gene: [[Ec-08_002600]]
| + | |
− | ** Source: [[annotation-esiliculosus_genome]] | + | |
− | *** Assignment: GO-TERM
| + | |
− | * Gene: [[Ec-25_001190]]
| + | |
− | ** Source: [[annotation-esiliculosus_genome]]
| + | |
− | *** Assignment: AUTOMATED-NAME-MATCH | + | |
− | * Gene: [[Ec-07_007610]]
| + | |
− | ** Source: [[annotation-esiliculosus_genome]]
| + | |
− | *** Assignment: GO-TERM
| + | |
− | * Gene: [[Ec-05_001560]]
| + | |
− | ** Source: [[annotation-esiliculosus_genome]]
| + | |
− | *** Assignment: GO-TERM
| + | |
− | * Gene: [[Ec-21_001700]]
| + | |
− | ** Source: [[annotation-esiliculosus_genome]]
| + | |
− | *** Assignment: EC-NUMBER
| + | |
− | * Gene: [[Ec-01_007140]]
| + | |
− | ** Source: [[annotation-esiliculosus_genome]]
| + | |
− | *** Assignment: GO-TERM
| + | |
− | == Pathways ==
| + | |
− | == Reconstruction information ==
| + | |
− | * Category: [[annotation]]
| + | |
− | ** Source: [[annotation-esiliculosus_genome]]
| + | |
− | *** Tool: [[pathwaytools]]
| + | |
| == External links == | | == External links == |
− | * LIGAND-RXN: | + | * ECOCYC: |
− | ** [http://www.genome.jp/dbget-bin/www_bget?R02585 R02585] | + | ** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6703 PWY-6703] |
− | * UNIPROT:
| + | {{#set: taxonomic range=TAX-2}} |
− | ** [http://www.uniprot.org/uniprot/P06800 P06800]
| + | {{#set: common name=preQ0 biosynthesis}} |
− | ** [http://www.uniprot.org/uniprot/P20483 P20483]
| + | {{#set: common name=deazapurine biosynthesis}} |
− | ** [http://www.uniprot.org/uniprot/P23748 P23748]
| + | {{#set: reaction found=1}} |
− | ** [http://www.uniprot.org/uniprot/P20417 P20417]
| + | {{#set: total reaction=4}} |
− | ** [http://www.uniprot.org/uniprot/P18433 P18433]
| + | {{#set: completion rate=25.0}} |
− | ** [http://www.uniprot.org/uniprot/P24666 P24666]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q06180 Q06180]
| + | |
− | ** [http://www.uniprot.org/uniprot/P30307 P30307]
| + | |
− | ** [http://www.uniprot.org/uniprot/P25044 P25044]
| + | |
− | ** [http://www.uniprot.org/uniprot/P27574 P27574]
| + | |
− | ** [http://www.uniprot.org/uniprot/P29074 P29074]
| + | |
− | ** [http://www.uniprot.org/uniprot/P26045 P26045]
| + | |
− | ** [http://www.uniprot.org/uniprot/P35234 P35234]
| + | |
− | ** [http://www.uniprot.org/uniprot/P35832 P35832]
| + | |
− | ** [http://www.uniprot.org/uniprot/P30304 P30304]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q03019 Q03019]
| + | |
− | ** [http://www.uniprot.org/uniprot/P11064 P11064]
| + | |
− | ** [http://www.uniprot.org/uniprot/P30306 P30306]
| + | |
− | ** [http://www.uniprot.org/uniprot/P30309 P30309]
| + | |
− | ** [http://www.uniprot.org/uniprot/P43378 P43378]
| + | |
− | ** [http://www.uniprot.org/uniprot/P29349 P29349]
| + | |
− | ** [http://www.uniprot.org/uniprot/P29351 P29351]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9W0G1 Q9W0G1]
| + | |
− | ** [http://www.uniprot.org/uniprot/P23471 P23471]
| + | |
− | ** [http://www.uniprot.org/uniprot/P35235 P35235]
| + | |
− | ** [http://www.uniprot.org/uniprot/P08575 P08575]
| + | |
− | ** [http://www.uniprot.org/uniprot/P18052 P18052]
| + | |
− | ** [http://www.uniprot.org/uniprot/P35822 P35822]
| + | |
− | ** [http://www.uniprot.org/uniprot/P23470 P23470]
| + | |
− | ** [http://www.uniprot.org/uniprot/P34138 P34138]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q24495 Q24495]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9W4F5 Q9W4F5]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q15426 Q15426]
| + | |
− | ** [http://www.uniprot.org/uniprot/P41499 P41499]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q28613 Q28613]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q28182 Q28182]
| + | |
− | ** [http://www.uniprot.org/uniprot/P15273 P15273]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q91870 Q91870]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q91976 Q91976]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q12923 Q12923]
| + | |
− | ** [http://www.uniprot.org/uniprot/P41893 P41893]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q62132 Q62132]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q92124 Q92124]
| + | |
− | ** [http://www.uniprot.org/uniprot/P23468 P23468]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q62917 Q62917]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q64696 Q64696]
| + | |
− | ** [http://www.uniprot.org/uniprot/P40347 P40347]
| + | |
− | ** [http://www.uniprot.org/uniprot/P16620 P16620]
| + | |
− | ** [http://www.uniprot.org/uniprot/P30305 P30305]
| + | |
− | ** [http://www.uniprot.org/uniprot/P29352 P29352]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q05909 Q05909]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q91871 Q91871]
| + | |
− | ** [http://www.uniprot.org/uniprot/P49446 P49446]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9CDL7 Q9CDL7]
| + | |
− | ** [http://www.uniprot.org/uniprot/P30311 P30311]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q64487 Q64487]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9JU65 Q9JU65]
| + | |
− | ** [http://www.uniprot.org/uniprot/P35992 P35992]
| + | |
− | ** [http://www.uniprot.org/uniprot/P0AAB2 P0AAB2]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9PN39 Q9PN39]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q16825 Q16825]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q12913 Q12913]
| + | |
− | ** [http://www.uniprot.org/uniprot/P48967 P48967]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q60998 Q60998]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q90815 Q90815]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q90816 Q90816]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q90817 Q90817]
| + | |
− | ** [http://www.uniprot.org/uniprot/P30310 P30310]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q62604 Q62604]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q64605 Q64605]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q05209 Q05209]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q60673 Q60673]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q62130 Q62130]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q15678 Q15678]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q92932 Q92932]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q90687 Q90687]
| + | |
− | ** [http://www.uniprot.org/uniprot/P79923 P79923]
| + | |
− | ** [http://www.uniprot.org/uniprot/O00197 O00197]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q61042 Q61042]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9ERM5 Q9ERM5]
| + | |
− | ** [http://www.uniprot.org/uniprot/P35236 P35236]
| + | |
− | ** [http://www.uniprot.org/uniprot/P35821 P35821]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q06124 Q06124]
| + | |
− | ** [http://www.uniprot.org/uniprot/O13016 O13016]
| + | |
− | ** [http://www.uniprot.org/uniprot/P23467 P23467]
| + | |
− | ** [http://www.uniprot.org/uniprot/P23469 P23469]
| + | |
− | ** [http://www.uniprot.org/uniprot/P35233 P35233]
| + | |
− | ** [http://www.uniprot.org/uniprot/P30634 P30634]
| + | |
− | ** [http://www.uniprot.org/uniprot/P28827 P28827]
| + | |
− | ** [http://www.uniprot.org/uniprot/P28828 P28828]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q64497 Q64497]
| + | |
− | ** [http://www.uniprot.org/uniprot/P29350 P29350]
| + | |
− | ** [http://www.uniprot.org/uniprot/P30303 P30303]
| + | |
− | ** [http://www.uniprot.org/uniprot/P32586 P32586]
| + | |
− | ** [http://www.uniprot.org/uniprot/P32587 P32587]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q02256 Q02256]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q8VBV0 Q8VBV0]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q8R169 Q8R169]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q64512 Q64512]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q29029 Q29029]
| + | |
− | ** [http://www.uniprot.org/uniprot/P38148 P38148]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q64604 Q64604]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q63745 Q63745]
| + | |
− | ** [http://www.uniprot.org/uniprot/P39155 P39155]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q64494 Q64494]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q62728 Q62728]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q64502 Q64502]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q64504 Q64504]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q46630 Q46630]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q17024 Q17024]
| + | |
− | ** [http://www.uniprot.org/uniprot/P35831 P35831]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q00684 Q00684]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q16827 Q16827]
| + | |
− | ** [http://www.uniprot.org/uniprot/P06652 P06652]
| + | |
− | ** [http://www.uniprot.org/uniprot/P29461 P29461]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q29500 Q29500]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q62370 Q62370]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q92735 Q92735]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q45408 Q45408]
| + | |
− | ** [http://www.uniprot.org/uniprot/O82710 O82710]
| + | |
− | ** [http://www.uniprot.org/uniprot/O88488 O88488]
| + | |
− | ** [http://www.uniprot.org/uniprot/O88902 O88902]
| + | |
− | ** [http://www.uniprot.org/uniprot/O94044 O94044]
| + | |
− | ** [http://www.uniprot.org/uniprot/O44329 O44329]
| + | |
− | ** [http://www.uniprot.org/uniprot/O76282 O76282]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q98936 Q98936]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q91054 Q91054]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q22582 Q22582]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q39491 Q39491]
| + | |
− | ** [http://www.uniprot.org/uniprot/O65190 O65190]
| + | |
− | ** [http://www.uniprot.org/uniprot/P16621 P16621]
| + | |
− | ** [http://www.uniprot.org/uniprot/P10586 P10586]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q64224 Q64224]
| + | |
− | ** [http://www.uniprot.org/uniprot/P18031 P18031]
| + | |
− | {{#set: direction=LEFT-TO-RIGHT}}
| + | |
− | {{#set: common name=protein tyrosine phosphatase}} | + | |
− | {{#set: common name=Putative tyrosine phosphatase}} | + | |
− | {{#set: common name=Dual specificity phosphatase, catalytic domain}} | + | |
− | {{#set: common name=Dual specificity phosphatase}} | + | |
− | {{#set: common name=Tyrosine/serine-protein phosphatase IphP-type}} | + | |
− | {{#set: ec number=EC-3.1.3.48}} | + | |
− | {{#set: gene associated=Ec-06_003660|Ec-11_005420|Ec-01_010740|Ec-12_001770|Ec-05_003800|Ec-08_002600|Ec-25_001190|Ec-07_007610|Ec-05_001560|Ec-21_001700|Ec-01_007140}}
| + | |
− | {{#set: in pathway=}}
| + | |
− | {{#set: reconstruction category=annotation}}
| + | |
− | {{#set: reconstruction source=annotation-esiliculosus_genome}}
| + | |
− | {{#set: reconstruction tool=pathwaytools}}
| + | |