Difference between revisions of "CYTIDEAM2-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11921 RXN-11921] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-methylcrotonyl-CoA:acetyl...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYTIDEAM2-RXN CYTIDEAM2-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11921 RXN-11921] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYTIDEAM2-RXN CYTIDEAM2-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** 3-methylcrotonyl-CoA:acetyl-CoA C-acyltransferase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1 EC-2.3.1]
+
** [http://enzyme.expasy.org/EC/3.5.4.5 EC-3.5.4.5]
 
* Synonym(s):
 
* Synonym(s):
−
** 5-methyl-3-oxo-4-hexenoyl-CoA thiolase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CO-A]][c] '''+''' 1 [[CPD-12906]][c] '''=>''' 1 [[3-METHYL-CROTONYL-COA]][c] '''+''' 1 [[ACETYL-COA]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[CYTIDINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[URIDINE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 coenzyme A[c] '''+''' 1 5-methyl-3-oxo-4-hexenoyl-CoA[c] '''=>''' 1 3-methylcrotonyl-CoA[c] '''+''' 1 acetyl-CoA[c]
+
** 1 H2O[c] '''+''' 1 cytidine[c] '''+''' 1 H+[c] '''=>''' 1 ammonium[c] '''+''' 1 uridine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* Gene: [[Ec-26_003940]]
 
−
** Source: [[orthology-aragem]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6672]], cis-genanyl-CoA degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6672 PWY-6672]
+
* [[PWY-7193]], pyrimidine ribonucleosides salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7193 PWY-7193]
−
** '''4''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY0-1295]], pyrimidine ribonucleosides degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1295 PWY0-1295]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6556]], pyrimidine ribonucleosides salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6556 PWY-6556]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[annotation]]
−
** Source: [[orthology-aragem]]
+
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pantograph]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16069 16069]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R08095 R08095]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01878 R01878]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P47718 P47718]
 +
** [http://www.uniprot.org/uniprot/P0ABF6 P0ABF6]
 +
** [http://www.uniprot.org/uniprot/P47298 P47298]
 +
** [http://www.uniprot.org/uniprot/Q9CFM8 Q9CFM8]
 +
** [http://www.uniprot.org/uniprot/P32320 P32320]
 +
** [http://www.uniprot.org/uniprot/P75051 P75051]
 +
** [http://www.uniprot.org/uniprot/Q9SU87 Q9SU87]
 +
** [http://www.uniprot.org/uniprot/Q9SU86 Q9SU86]
 +
** [http://www.uniprot.org/uniprot/O65571 O65571]
 +
** [http://www.uniprot.org/uniprot/Q9S847 Q9S847]
 +
** [http://www.uniprot.org/uniprot/Q9S7L8 Q9S7L8]
 +
** [http://www.uniprot.org/uniprot/Q9S7S2 Q9S7S2]
 +
** [http://www.uniprot.org/uniprot/O65896 O65896]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=3-methylcrotonyl-CoA:acetyl-CoA C-acyltransferase}}
+
{{#set: ec number=EC-3.5.4.5}}
−
{{#set: ec number=EC-2.3.1}}
+
{{#set: in pathway=PWY-7193|PWY0-1295|PWY-6556}}
−
{{#set: common name=5-methyl-3-oxo-4-hexenoyl-CoA thiolase}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: gene associated=Ec-26_003940}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
{{#set: in pathway=PWY-6672}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction source=orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 19:16, 21 March 2018

Reaction CYTIDEAM2-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 cytidine[c] + 1 H+[c] => 1 ammonium[c] + 1 uridine[c]

Genes associated with this reaction

Pathways

  • PWY-7193, pyrimidine ribonucleosides salvage I: PWY-7193
    • 3 reactions found over 3 reactions in the full pathway
  • PWY0-1295, pyrimidine ribonucleosides degradation: PWY0-1295
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6556, pyrimidine ribonucleosides salvage II: PWY-6556
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links




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