Difference between revisions of "RXN-10625"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD0-2108 CPD0-2108] == * smiles: ** CCCCCC=CC(=O)SCCNC(=O)CCNC(C(O)C(C)(C)COP([O-])(=O)OP([O-]...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10625 RXN-10625] == * direction: ** LEFT-TO-RIGHT * common name: ** Geranylgeranyl reductase *...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD0-2108 CPD0-2108] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10625 RXN-10625] ==
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* smiles:
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* direction:
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** CCCCCC=CC(=O)SCCNC(=O)CCNC(C(O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OCC1(C(OP(=O)([O-])[O-])C(O)C(O1)N3(C=NC2(C(N)=NC=NC=23))))=O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=CPSDNAXXKWVYIY-NTLMCJQISA-J
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* common name:
 
* common name:
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** trans-oct-2-enoyl-CoA
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** Geranylgeranyl reductase
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* molecular weight:
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* ec number:
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** 887.685   
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** [http://enzyme.expasy.org/EC/1.3.1.83 EC-1.3.1.83]
 
* Synonym(s):
 
* Synonym(s):
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** (2E)-octenoyl-CoA
 
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** trans-2-octenoyl-coenzyme A
 
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** 3'-phosphoadenosine 5'-{3-[(3R)-3-hydroxy-2,2-dimethyl-4-({3-[(2-{[(2E)-oct-2-enoyl]sulfanyl}ethyl)amino]-3-oxopropyl}amino)-4-oxobutyl] dihydrogen diphosphate}
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-12669]]
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** 3 [[NADPH]][c] '''+''' 1 [[GERANYLGERANYL-PP]][c] '''+''' 3 [[PROTON]][c] '''=>''' 1 [[PHYTYL-PYROPHOSPHATE]][c] '''+''' 3 [[NADP]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 3 NADPH[c] '''+''' 1 geranylgeranyl diphosphate[c] '''+''' 3 H+[c] '''=>''' 1 phytyl diphosphate[c] '''+''' 3 NADP+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-03_003520]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-aragem]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* LIGAND-CPD:
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* RHEA:
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** [http://www.genome.jp/dbget-bin/www_bget?C05276 C05276]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26229 26229]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=62242 62242]
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** [http://www.genome.jp/dbget-bin/www_bget?R02063 R02063]
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* BIGG : 45482
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=Geranylgeranyl reductase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=46173358 46173358]
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{{#set: ec number=EC-1.3.1.83}}
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* HMDB : HMDB03949
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{{#set: gene associated=Ec-03_003520}}
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{{#set: smiles=CCCCCC=CC(=O)SCCNC(=O)CCNC(C(O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OCC1(C(OP(=O)([O-])[O-])C(O)C(O1)N3(C=NC2(C(N)=NC=NC=23))))=O}}
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{{#set: in pathway=}}
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{{#set: inchi key=InChIKey=CPSDNAXXKWVYIY-NTLMCJQISA-J}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: common name=trans-oct-2-enoyl-CoA}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: molecular weight=887.685    }}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: common name=(2E)-octenoyl-CoA|trans-2-octenoyl-coenzyme A|3'-phosphoadenosine 5'-{3-[(3R)-3-hydroxy-2,2-dimethyl-4-({3-[(2-{[(2E)-oct-2-enoyl]sulfanyl}ethyl)amino]-3-oxopropyl}amino)-4-oxobutyl] dihydrogen diphosphate}}}
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{{#set: produced by=RXN-12669}}
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Latest revision as of 19:31, 21 March 2018

Reaction RXN-10625

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Geranylgeranyl reductase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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