Difference between revisions of "Ec-17 002680"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.19-RXN 2.5.1.19-RXN] == * direction: ** REVERSIBLE * common name: ** 3-Phosphoshikimate 1-Car...")
(Created page with "Category:Gene == Gene Ec-17_002680 == * left end position: ** 2865242 * transcription direction: ** POSITIVE * right end position: ** 2867734 * centisome position: ** 59.7...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.19-RXN 2.5.1.19-RXN] ==
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== Gene Ec-17_002680 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 2865242
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* common name:
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* transcription direction:
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** 3-Phosphoshikimate 1-Carboxyvinyltransferase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.5.1.19 EC-2.5.1.19]
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** 2867734
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* centisome position:
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** 59.718086   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0026_0123
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** Esi0026_0123
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN0-2381]]
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** 1 [[SHIKIMATE-5P]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''<=>''' 1 [[3-ENOLPYRUVYL-SHIKIMATE-5P]][c] '''+''' 1 [[Pi]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 shikimate 3-phosphate[c] '''+''' 1 phosphoenolpyruvate[c] '''<=>''' 1 5-enolpyruvoyl-shikimate 3-phosphate[c] '''+''' 1 phosphate[c]
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* Reaction: [[RXN0-2382]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-26_000800]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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*** Assignment: automated-name-match
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** Source: [[orthology-aragem]]
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* Reaction: [[TRYPSYN-RXN]]
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== Pathways  ==
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* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[TRPSYN-PWY]]
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* [[PWY-6949]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2865242}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21256 21256]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2867734}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03460 R03460]
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{{#set: centisome position=59.718086    }}
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* UNIPROT:
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{{#set: common name=Esi_0026_0123|Esi0026_0123}}
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** [http://www.uniprot.org/uniprot/P22299 P22299]
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{{#set: reaction associated=RXN0-2381|RXN0-2382|TRYPSYN-RXN}}
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** [http://www.uniprot.org/uniprot/P07547 P07547]
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{{#set: pathway associated=TRPSYN-PWY|PWY-6949}}
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** [http://www.uniprot.org/uniprot/P08566 P08566]
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** [http://www.uniprot.org/uniprot/P22487 P22487]
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** [http://www.uniprot.org/uniprot/P52312 P52312]
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** [http://www.uniprot.org/uniprot/Q9JTT3 Q9JTT3]
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** [http://www.uniprot.org/uniprot/Q03421 Q03421]
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** [http://www.uniprot.org/uniprot/P19786 P19786]
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** [http://www.uniprot.org/uniprot/P17688 P17688]
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** [http://www.uniprot.org/uniprot/P24497 P24497]
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** [http://www.uniprot.org/uniprot/P23981 P23981]
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** [http://www.uniprot.org/uniprot/P23281 P23281]
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** [http://www.uniprot.org/uniprot/Q04570 Q04570]
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** [http://www.uniprot.org/uniprot/P43905 P43905]
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** [http://www.uniprot.org/uniprot/Q59975 Q59975]
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** [http://www.uniprot.org/uniprot/P12421 P12421]
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** [http://www.uniprot.org/uniprot/P07637 P07637]
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** [http://www.uniprot.org/uniprot/P19688 P19688]
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** [http://www.uniprot.org/uniprot/P0A6D3 P0A6D3]
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** [http://www.uniprot.org/uniprot/P11043 P11043]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=3-Phosphoshikimate 1-Carboxyvinyltransferase}}
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{{#set: ec number=EC-2.5.1.19}}
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{{#set: gene associated=Ec-26_000800}}
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{{#set: in pathway=PWY-6163}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:33, 21 March 2018

Gene Ec-17_002680

  • left end position:
    • 2865242
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2867734
  • centisome position:
    • 59.718086
  • Synonym(s):
    • Esi_0026_0123
    • Esi0026_0123

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-17_002680&oldid=27781"