Difference between revisions of "Ec-27 004950"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17105 RXN-17105] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Gene == Gene Ec-27_004950 == * left end position: ** 4452569 * transcription direction: ** NEGATIVE * right end position: ** 4464320 * centisome position: ** 69.0...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17105 RXN-17105] ==
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== Gene Ec-27_004950 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4452569
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.14.19 EC-1.14.19]
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** NEGATIVE
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* right end position:
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** 4464320
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* centisome position:
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** 69.03307   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0000_0287
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** Esi0000_0287
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PEROXID-RXN]]
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** 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[CPD-12646]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-14407]][c] '''+''' 2 [[WATER]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 2 a ferrocytochrome b5[c] '''+''' 1 (11Z,14Z)-icosa-11,14-dienoyl-CoA[c] '''+''' 1 oxygen[c] '''+''' 2 H+[c] '''=>''' 1 dihomo γ-linolenoyl-CoA[c] '''+''' 2 H2O[c] '''+''' 2 a ferricytochrome b5[c]
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* Reaction: [[RXN-14240]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: go-term
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== Pathways  ==
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* Reaction: [[RXN-15288]]
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* [[PWY-7725]], arachidonate biosynthesis V (8-detaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7725 PWY-7725]
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** Source: [[annotation-esiliculosus_genome]]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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*** Assignment: go-term
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== Reconstruction information  ==
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* Reaction: [[RXN-17352]]
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* Category: [[gap-filling]]
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** Source: [[annotation-esiliculosus_genome]]
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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*** Assignment: go-term
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*** Tool: [[meneco]]
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* Reaction: [[RXN-8635]]
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**** Comment: [[added for gapfilling]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-7214]]
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* [[PWY-6824]]
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* [[PWY-7445]]
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* [[PWY-5469]]
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* [[PWY-5466]]
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* [[PWY-5461]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=4452569}}
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{{#set: ec number=EC-1.14.19}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: in pathway=PWY-7725}}
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{{#set: right end position=4464320}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: centisome position=69.03307    }}
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{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
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{{#set: common name=Esi_0000_0287|Esi0000_0287}}
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{{#set: reconstruction tool=meneco}}
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{{#set: reaction associated=PEROXID-RXN|RXN-14240|RXN-15288|RXN-17352|RXN-8635}}
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{{#set: reconstruction comment=added for gapfilling}}
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{{#set: pathway associated=PWY-7214|PWY-6824|PWY-7445|PWY-5469|PWY-5466|PWY-5461}}

Latest revision as of 19:45, 21 March 2018

Gene Ec-27_004950

  • left end position:
    • 4452569
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4464320
  • centisome position:
    • 69.03307
  • Synonym(s):
    • Esi_0000_0287
    • Esi0000_0287

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-27_004950&oldid=29122"