Difference between revisions of "Ec-12 008700"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGININE--TRNA-LIGASE-RXN ARGININE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBULOSYL-FORMIMINO-AICAR-P PHOSPHORIBULOSYL-FORMIMINO-AICAR-P] == * smiles: ** C(OP(=O)...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGININE--TRNA-LIGASE-RXN ARGININE--TRNA-LIGASE-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBULOSYL-FORMIMINO-AICAR-P PHOSPHORIBULOSYL-FORMIMINO-AICAR-P] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(OP(=O)([O-])[O-])C(O)C(O)C(=O)CN=CNC1(=C(N=CN1C2(C(O)C(C(COP(=O)([O-])[O-])O2)O))C(=O)N)
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* inchi key:
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** InChIKey=BLKFNHOCHNCLII-GHVQHMAVSA-J
 
* common name:
 
* common name:
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** DALR anticodon binding
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** phosphoribulosylformimino-AICAR-P
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** Arginyl-tRNA Synthetase
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* molecular weight:
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* ec number:
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** 573.303   
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** [http://enzyme.expasy.org/EC/6.1.1.19 EC-6.1.1.19]
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* Synonym(s):
 
* Synonym(s):
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** 5-[(5-phospho-1-deoxy-β-D-ribulos-1-ylamino)methylideneamino]-1-(5-phosphoribosyl)imidazole-4-carboxamide
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** N-(5'-phospho-D-1'-ribulosylformimino)-5-amino-1-(5''-phosphoribosyl)-4-imidazolecarboxamide
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** phosphoribulosylformiminoAICAR-phosphate
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** phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribotide phosphate
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** phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate
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** PRFAR
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** N-(5'phospho-D-1'-ribulosylformimino)-5-amino-1-(5-phosphoribosyl)-4-imidazolecarboxamide
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[GLUTAMIDOTRANS-RXN]]
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** 1 [[ARG-tRNAs]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[ARG]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-ARG-tRNAs]][c] '''+''' 1 [[PPI]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[PRIBFAICARPISOM-RXN]]
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** 1 a tRNAarg[c] '''+''' 1 ATP[c] '''+''' 1 L-arginine[c] '''+''' 1 H+[c] '''=>''' 1 AMP[c] '''+''' 1 an L-arginyl-[tRNAarg][c] '''+''' 1 diphosphate[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-03_001410]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-01_003640]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* LIGAND-CPD:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20301 20301]
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** [http://www.genome.jp/dbget-bin/www_bget?C04916 C04916]
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* LIGAND-RXN:
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* CHEBI:
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** [http://www.genome.jp/dbget-bin/www_bget?R03646 R03646]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58525 58525]
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* UNIPROT:
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* BIGG : 44913
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** [http://www.uniprot.org/uniprot/P40329 P40329]
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/P35868 P35868]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=45266672 45266672]
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** [http://www.uniprot.org/uniprot/P43832 P43832]
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* HMDB : HMDB12278
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** [http://www.uniprot.org/uniprot/O51540 O51540]
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{{#set: smiles=C(OP(=O)([O-])[O-])C(O)C(O)C(=O)CN=CNC1(=C(N=CN1C2(C(O)C(C(COP(=O)([O-])[O-])O2)O))C(=O)N)}}
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** [http://www.uniprot.org/uniprot/O67068 O67068]
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{{#set: inchi key=InChIKey=BLKFNHOCHNCLII-GHVQHMAVSA-J}}
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** [http://www.uniprot.org/uniprot/O59147 O59147]
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{{#set: common name=phosphoribulosylformimino-AICAR-P}}
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** [http://www.uniprot.org/uniprot/O83803 O83803]
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{{#set: molecular weight=573.303    }}
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** [http://www.uniprot.org/uniprot/Q9ZE81 Q9ZE81]
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{{#set: common name=5-[(5-phospho-1-deoxy-β-D-ribulos-1-ylamino)methylideneamino]-1-(5-phosphoribosyl)imidazole-4-carboxamide|N-(5'-phospho-D-1'-ribulosylformimino)-5-amino-1-(5''-phosphoribosyl)-4-imidazolecarboxamide|phosphoribulosylformiminoAICAR-phosphate|phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribotide phosphate|phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate|PRFAR|N-(5'phospho-D-1'-ribulosylformimino)-5-amino-1-(5-phosphoribosyl)-4-imidazolecarboxamide}}
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** [http://www.uniprot.org/uniprot/Q9PNC0 Q9PNC0]
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{{#set: consumed by=GLUTAMIDOTRANS-RXN}}
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** [http://www.uniprot.org/uniprot/Q9X0H8 Q9X0H8]
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{{#set: produced by=PRIBFAICARPISOM-RXN}}
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** [http://www.uniprot.org/uniprot/P46906 P46906]
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** [http://www.uniprot.org/uniprot/Q57689 Q57689]
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** [http://www.uniprot.org/uniprot/O27496 O27496]
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** [http://www.uniprot.org/uniprot/Q9JTM7 Q9JTM7]
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** [http://www.uniprot.org/uniprot/Q9CE12 Q9CE12]
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** [http://www.uniprot.org/uniprot/P56128 P56128]
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** [http://www.uniprot.org/uniprot/P47618 P47618]
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** [http://www.uniprot.org/uniprot/Q9ZMB9 Q9ZMB9]
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** [http://www.uniprot.org/uniprot/Q08888 Q08888]
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** [http://www.uniprot.org/uniprot/P54136 P54136]
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** [http://www.uniprot.org/uniprot/P38714 P38714]
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** [http://www.uniprot.org/uniprot/Q05506 Q05506]
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** [http://www.uniprot.org/uniprot/P75222 P75222]
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** [http://www.uniprot.org/uniprot/P11875 P11875]
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** [http://www.uniprot.org/uniprot/O23247 O23247]
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** [http://www.uniprot.org/uniprot/O74781 O74781]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=DALR anticodon binding}}
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{{#set: common name=Arginyl-tRNA Synthetase}}
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{{#set: ec number=EC-6.1.1.19}}
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{{#set: gene associated=Ec-03_001410|Ec-01_003640}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 21:25, 17 March 2018

Metabolite PHOSPHORIBULOSYL-FORMIMINO-AICAR-P

  • smiles:
    • C(OP(=O)([O-])[O-])C(O)C(O)C(=O)CN=CNC1(=C(N=CN1C2(C(O)C(C(COP(=O)([O-])[O-])O2)O))C(=O)N)
  • inchi key:
    • InChIKey=BLKFNHOCHNCLII-GHVQHMAVSA-J
  • common name:
    • phosphoribulosylformimino-AICAR-P
  • molecular weight:
    • 573.303
  • Synonym(s):
    • 5-[(5-phospho-1-deoxy-β-D-ribulos-1-ylamino)methylideneamino]-1-(5-phosphoribosyl)imidazole-4-carboxamide
    • N-(5'-phospho-D-1'-ribulosylformimino)-5-amino-1-(5-phosphoribosyl)-4-imidazolecarboxamide
    • phosphoribulosylformiminoAICAR-phosphate
    • phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribotide phosphate
    • phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate
    • PRFAR
    • N-(5'phospho-D-1'-ribulosylformimino)-5-amino-1-(5-phosphoribosyl)-4-imidazolecarboxamide

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C(OP(=O)([O-])[O-])C(O)C(O)C(=O)CN=CNC1(=C(N=CN1C2(C(O)C(C(COP(=O)([O-])[O-])O2)O))C(=O)N)" cannot be used as a page name in this wiki.


"5-[(5-phospho-1-deoxy-β-D-ribulos-1-ylamino)methylideneamino]-1-(5-phosphoribosyl)imidazole-4-carboxamide" cannot be used as a page name in this wiki.


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