Difference between revisions of "PWY-5068"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.117-RXN 2.4.1.117-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Dolichyl-phosphate...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-12...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.117-RXN 2.4.1.117-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
 
* common name:
 
* common name:
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** Dolichyl-phosphate beta-glucosyltransferase, family GT2
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** L-lysine biosynthesis II
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* ec number:
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** [http://enzyme.expasy.org/EC/2.4.1.117 EC-2.4.1.117]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''6''' reactions found over '''9''' reactions in the full pathway
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** 1 [[DOLICHOLP]][c] '''+''' 1 [[CPD-12575]][c] '''=>''' 1 [[CPD-166]][c] '''+''' 1 [[UDP]][c]
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* [[ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 a dolichyl phosphate[c] '''+''' 1 UDP-α-D-glucose[c] '''=>''' 1 a dolichyl β-D-glucosyl phosphate[c] '''+''' 1 UDP[c]
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*** [[Ec-01_007470]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-aragem]]
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* [[Ec-06_003490]]
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* [[ASPARTATEKIN-RXN]]
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** ESILICULOSUS_GENOME
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** 4 associated gene(s):
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***EC-NUMBER
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*** [[Ec-24_000610]]
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** [[pantograph]]-[[aragem]]
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*** [[Ec-11_000830]]
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== Pathways  ==
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*** [[Ec-27_003730]]
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
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*** [[Ec-13_002530]]
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** '''19''' reactions found over '''19''' reactions in the full pathway
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** 2 reconstruction source(s) associated:
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== Reconstruction information  ==
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*** [[annotation-esiliculosus_genome]]
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* Category: [[orthology]]
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*** [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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* [[DIAMINOPIMDECARB-RXN]]
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*** Tool: [[pantograph]]
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** 4 associated gene(s):
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* Category: [[annotation]]
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*** [[Ec-01_000060]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-09_002360]]
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*** Tool: [[pathwaytools]]
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*** [[Ec-09_002410]]
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*** [[Ec-09_002420]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[DIAMINOPIMEPIM-RXN]]
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** 1 associated gene(s):
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*** [[Ec-06_009100]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[DIHYDRODIPICSYN-RXN]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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* [[RXN-14014]]
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** 1 associated gene(s):
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*** [[Ec-15_000750]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.89-RXN 2.3.1.89-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=N-ACETYLDIAMINOPIMELATE-DEACETYLASE-RXN N-ACETYLDIAMINOPIMELATE-DEACETYLASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4822 RXN-4822]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-1239}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15401 15401]
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{{#set: common name=L-lysine biosynthesis II}}
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* LIGAND-RXN:
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{{#set: reaction found=6}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01005 R01005]
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{{#set: total reaction=9}}
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* UNIPROT:
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{{#set: completion rate=67.0}}
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** [http://www.uniprot.org/uniprot/P40350 P40350]
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** [http://www.uniprot.org/uniprot/Q9UUT0 Q9UUT0]
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** [http://www.uniprot.org/uniprot/Q9Y673 Q9Y673]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Dolichyl-phosphate beta-glucosyltransferase, family GT2}}
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{{#set: ec number=EC-2.4.1.117}}
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{{#set: gene associated=Ec-06_003490}}
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{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 13:11, 21 March 2018

Pathway PWY-2941

  • taxonomic range:
  • common name:
    • L-lysine biosynthesis II
  • Synonym(s):

Reaction(s) found

6 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-5068&oldid=16339"