Difference between revisions of "PWY3O-4108"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13603 RXN-13603] == * direction: ** LEFT-TO-RIGHT * common name: ** neolinustatin β-digluc...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=FERMENTATION-PWY FERMENTATION-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13603 RXN-13603] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=FERMENTATION-PWY FERMENTATION-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** neolinustatin β-diglucosidase
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** mixed acid fermentation
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** Beta-glucosidase, family GH1
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** Beta-glucosidase, family GH30
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** Beta-glucosidase, family GH3
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* ec number:
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** [http://enzyme.expasy.org/EC/3.2.1.21 EC-3.2.1.21]
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* Synonym(s):
 
* Synonym(s):
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** fermentation
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''8''' reactions found over '''16''' reactions in the full pathway
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** 1 [[WATER]][c] '''+''' 1 [[CPD-14596]][c] '''=>''' 1 [[CPD-10277]][c] '''+''' 1 [[Glucopyranose]][c]
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* [[ACONITATEDEHYDR-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 H2O[c] '''+''' 1 neolinustatin[c] '''=>''' 1 lotaustralin[c] '''+''' 1 D-glucopyranose[c]
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*** [[Ec-16_001000]]
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*** [[Ec-12_000170]]
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== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-esiliculosus_genome]]
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* [[Ec-07_005240]]
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* [[ACONITATEHYDR-RXN]]
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** ESILICULOSUS_GENOME
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** 2 associated gene(s):
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***EC-NUMBER
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*** [[Ec-12_000170]]
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* [[Ec-26_002410]]
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*** [[Ec-16_001000]]
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** ESILICULOSUS_GENOME
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** 1 reconstruction source(s) associated:
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***EC-NUMBER
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*** [[annotation-esiliculosus_genome]]
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* [[Ec-20_004800]]
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* [[CITSYN-RXN]]
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** ESILICULOSUS_GENOME
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** 0 associated gene:
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***EC-NUMBER
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** 1 reconstruction source(s) associated:
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* [[Ec-04_002190]]
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*** [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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* [[FUMHYDR-RXN]]
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***EC-NUMBER
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** 2 associated gene(s):
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* [[Ec-07_001850]]
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*** [[Ec-23_003460]]
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** ESILICULOSUS_GENOME
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*** [[Ec-25_001360]]
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***EC-NUMBER
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** 2 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-esiliculosus_genome]]
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* [[PWY-7092]], neolinustatin bioactivation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7092 PWY-7092]
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*** [[orthology-aragem]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[ISOCITDEH-RXN]]
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== Reconstruction information  ==
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** 1 associated gene(s):
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* [[annotation]]:
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*** [[Ec-11_003080]]
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** [[pathwaytools]]:
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** 1 reconstruction source(s) associated:
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*** [[esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
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* [[MALATE-DEH-RXN]]
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** 2 associated gene(s):
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*** [[Ec-10_006200]]
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*** [[Ec-02_003100]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[PEPCARBOX-RXN]]
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** 1 associated gene(s):
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*** [[Ec-28_003470]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[PEPDEPHOS-RXN]]
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** 3 associated gene(s):
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*** [[Ec-26_004170]]
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*** [[Ec-12_000950]]
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*** [[Ec-06_006860]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=ACETALD-DEHYDROG-RXN ACETALD-DEHYDROG-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=ACETATEKIN-RXN ACETATEKIN-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=ALCOHOL-DEHYDROG-RXN ALCOHOL-DEHYDROG-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=DLACTDEHYDROGNAD-RXN DLACTDEHYDROGNAD-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=FHLMULTI-RXN FHLMULTI-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PHOSACETYLTRANS-RXN PHOSACETYLTRANS-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PYRUVFORMLY-RXN PYRUVFORMLY-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* ECOCYC:
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{{#set: common name=neolinustatin β-diglucosidase}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=FERMENTATION-PWY FERMENTATION-PWY]
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{{#set: common name=Beta-glucosidase, family GH1}}
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{{#set: taxonomic range=TAX-4751}}
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{{#set: common name=Beta-glucosidase, family GH30}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=Beta-glucosidase, family GH3}}
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{{#set: common name=mixed acid fermentation}}
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{{#set: ec number=EC-3.2.1.21}}
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{{#set: common name=fermentation}}
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{{#set: gene associated=Ec-07_005240|Ec-26_002410|Ec-20_004800|Ec-04_002190|Ec-07_001850}}
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{{#set: reaction found=8}}
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{{#set: in pathway=PWY-7092}}
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{{#set: total reaction=16}}
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{{#set: reconstruction category=annotation}}
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{{#set: completion rate=50.0}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 21:52, 17 March 2018

Pathway FERMENTATION-PWY

  • taxonomic range:
  • common name:
    • mixed acid fermentation
  • Synonym(s):
    • fermentation

Reaction(s) found

8 reactions found over 16 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY3O-4108&oldid=10677"