Difference between revisions of "CPD-469"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2OXOGLUTDECARB-RXN 2OXOGLUTDECARB-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** dihydroli...")
 
(Created page with "Category:Gene == Gene Ec-04_002930 == * left end position: ** 3043784 * transcription direction: ** NEGATIVE * right end position: ** 3050477 * centisome position: ** 46.7...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2OXOGLUTDECARB-RXN 2OXOGLUTDECARB-RXN] ==
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== Gene Ec-04_002930 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3043784
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* common name:
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* transcription direction:
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** dihydrolipoamide dehydrogenase
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** NEGATIVE
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** Oxoglutarate dehydrogenase, N-terminal part
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* right end position:
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** 2-oxoglutarate dehydrogenase E1 component
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** 3050477
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.2.4.2 EC-1.2.4.2]
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** 46.742226   
 
* Synonym(s):
 
* Synonym(s):
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** Oxoglutarate decarboxylase
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** Esi_0201_0019
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** 2-oxoglutarate decarboxylation
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** Esi0201_0019
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[PROTEIN-KINASE-RXN]]
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** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Oxo-glutarate-dehydrogenase-lipoyl]][c] '''=>''' 1 [[Oxo-glutarate-dehydro-suc-DH-lipoyl]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** esiliculosus_genome
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* With common name(s):
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***go-term
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** 1 2-oxoglutarate[c] '''+''' 1 H+[c] '''+''' 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''=>''' 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-S-succinyldihydrolipoyl-L-lysine[c] '''+''' 1 CO2[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-25_000020]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-21_002300]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-27_004160]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-21_002310]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways ==
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* [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398]
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** '''10''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-5084]], 2-oxoglutarate decarboxylation to succinyl-CoA: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5084 PWY-5084]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: left end position=3043784}}
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** [http://www.uniprot.org/uniprot/P23129 P23129]
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.uniprot.org/uniprot/Q02218 Q02218]
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{{#set: right end position=3050477}}
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** [http://www.uniprot.org/uniprot/Q60597 Q60597]
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{{#set: centisome position=46.742226    }}
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** [http://www.uniprot.org/uniprot/Q9JRJ8 Q9JRJ8]
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{{#set: common name=Esi_0201_0019|Esi0201_0019}}
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** [http://www.uniprot.org/uniprot/P20967 P20967]
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{{#set: reaction associated=PROTEIN-KINASE-RXN}}
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** [http://www.uniprot.org/uniprot/P0AFG3 P0AFG3]
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** [http://www.uniprot.org/uniprot/P20707 P20707]
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** [http://www.uniprot.org/uniprot/P51056 P51056]
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** [http://www.uniprot.org/uniprot/Q56600 Q56600]
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** [http://www.uniprot.org/uniprot/O49541 O49541]
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** [http://www.uniprot.org/uniprot/Q59106 Q59106]
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** [http://www.uniprot.org/uniprot/Q9M2T8 Q9M2T8]
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** [http://www.uniprot.org/uniprot/Q9ZRQ2 Q9ZRQ2]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=dihydrolipoamide dehydrogenase}}
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{{#set: common name=Oxoglutarate dehydrogenase, N-terminal part}}
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{{#set: common name=2-oxoglutarate dehydrogenase E1 component}}
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{{#set: ec number=EC-1.2.4.2}}
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{{#set: common name=Oxoglutarate decarboxylase|2-oxoglutarate decarboxylation}}
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{{#set: gene associated=Ec-25_000020|Ec-21_002300|Ec-27_004160|Ec-21_002310}}
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{{#set: in pathway=PWY66-398|PWY-5084}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 22:27, 17 March 2018

Gene Ec-04_002930

  • left end position:
    • 3043784
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3050477
  • centisome position:
    • 46.742226
  • Synonym(s):
    • Esi_0201_0019
    • Esi0201_0019

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-469&oldid=13090"