Difference between revisions of "Ec-25 000240"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2043 RXN-2043] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycoside hydrolase, catalyti...")
(Created page with "Category:Gene == Gene Ec-11_003800 == * left end position: ** 3838128 * transcription direction: ** NEGATIVE * right end position: ** 3843258 * centisome position: ** 61.0...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2043 RXN-2043] ==
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== Gene Ec-11_003800 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3838128
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* common name:
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* transcription direction:
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** Glycoside hydrolase, catalytic domain
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** NEGATIVE
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** Glycoside hydrolase/deacetylase, beta/alpha-barrel
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* right end position:
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* ec number:
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** 3843258
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** [http://enzyme.expasy.org/EC/3.2.1.4 EC-3.2.1.4]
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* centisome position:
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** 61.022842   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0234_0012
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** Esi0234_0012
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** flavin-containin
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.14.13.8-RXN]]
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** 1 [[CELLULOSE]][c] '''+''' n [[WATER]][c] '''=>''' n [[Cellodextrins]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 cellulose[c] '''+''' n H2O[c] '''=>''' n a cellodextrin[c]
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* Reaction: [[RXN66-81]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-19_000430]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-08_004650]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-23_003530]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-6788]], cellulose degradation II (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6788 PWY-6788]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY66-201]]
 
== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: left end position=3838128}}
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** [http://www.uniprot.org/uniprot/O64949 O64949]
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.uniprot.org/uniprot/O64402 O64402]
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{{#set: right end position=3843258}}
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** [http://www.uniprot.org/uniprot/O59943 O59943]
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{{#set: centisome position=61.022842    }}
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** [http://www.uniprot.org/uniprot/P22503 P22503]
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{{#set: common name=Esi_0234_0012|Esi0234_0012|flavin-containin}}
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** [http://www.uniprot.org/uniprot/O50014 O50014]
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{{#set: reaction associated=1.14.13.8-RXN|RXN66-81}}
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** [http://www.uniprot.org/uniprot/O50013 O50013]
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{{#set: pathway associated=PWY66-201}}
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** [http://www.uniprot.org/uniprot/O50012 O50012]
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** [http://www.uniprot.org/uniprot/O50011 O50011]
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** [http://www.uniprot.org/uniprot/O64401 O64401]
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** [http://www.uniprot.org/uniprot/O23954 O23954]
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** [http://www.uniprot.org/uniprot/O22298 O22298]
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** [http://www.uniprot.org/uniprot/O22297 O22297]
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** [http://www.uniprot.org/uniprot/O04890 O04890]
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** [http://www.uniprot.org/uniprot/Q39848 Q39848]
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** [http://www.uniprot.org/uniprot/Q39847 Q39847]
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** [http://www.uniprot.org/uniprot/O04972 O04972]
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** [http://www.uniprot.org/uniprot/Q41012 Q41012]
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** [http://www.uniprot.org/uniprot/Q39826 Q39826]
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** [http://www.uniprot.org/uniprot/Q42872 Q42872]
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** [http://www.uniprot.org/uniprot/Q42871 Q42871]
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** [http://www.uniprot.org/uniprot/Q9SVJ2 Q9SVJ2]
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** [http://www.uniprot.org/uniprot/Q9SVJ3 Q9SVJ3]
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** [http://www.uniprot.org/uniprot/Q9SVJ4 Q9SVJ4]
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** [http://www.uniprot.org/uniprot/Q9SUS0 Q9SUS0]
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** [http://www.uniprot.org/uniprot/Q9SZ90 Q9SZ90]
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** [http://www.uniprot.org/uniprot/O64890 O64890]
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** [http://www.uniprot.org/uniprot/O64889 O64889]
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** [http://www.uniprot.org/uniprot/O82513 O82513]
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** [http://www.uniprot.org/uniprot/O80497 O80497]
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** [http://www.uniprot.org/uniprot/O64891 O64891]
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** [http://www.uniprot.org/uniprot/O81416 O81416]
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** [http://www.uniprot.org/uniprot/O48766 O48766]
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** [http://www.uniprot.org/uniprot/Q55365 Q55365]
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** [http://www.uniprot.org/uniprot/Q38890 Q38890]
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** [http://www.uniprot.org/uniprot/Q12665 Q12665]
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** [http://www.uniprot.org/uniprot/Q43751 Q43751]
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** [http://www.uniprot.org/uniprot/Q9SML6 Q9SML6]
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** [http://www.uniprot.org/uniprot/Q43750 Q43750]
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** [http://www.uniprot.org/uniprot/Q38817 Q38817]
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** [http://www.uniprot.org/uniprot/P43317 P43317]
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** [http://www.uniprot.org/uniprot/Q42875 Q42875]
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** [http://www.uniprot.org/uniprot/Q42660 Q42660]
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** [http://www.uniprot.org/uniprot/Q59665 Q59665]
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** [http://www.uniprot.org/uniprot/Q59395 Q59395]
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** [http://www.uniprot.org/uniprot/Q43149 Q43149]
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** [http://www.uniprot.org/uniprot/Q12624 Q12624]
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** [http://www.uniprot.org/uniprot/P38534 P38534]
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** [http://www.uniprot.org/uniprot/P23666 P23666]
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** [http://www.uniprot.org/uniprot/P19424 P19424]
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** [http://www.uniprot.org/uniprot/P07982 P07982]
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** [http://www.uniprot.org/uniprot/Q05156 Q05156]
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** [http://www.uniprot.org/uniprot/Q7M0M9 Q7M0M9]
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** [http://www.uniprot.org/uniprot/Q9R5L7 Q9R5L7]
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** [http://www.uniprot.org/uniprot/Q53302 Q53302]
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** [http://www.uniprot.org/uniprot/P26224 P26224]
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** [http://www.uniprot.org/uniprot/P21834 P21834]
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** [http://www.uniprot.org/uniprot/P21833 P21833]
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** [http://www.uniprot.org/uniprot/P22669 P22669]
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** [http://www.uniprot.org/uniprot/P05522 P05522]
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** [http://www.uniprot.org/uniprot/P07103 P07103]
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** [http://www.uniprot.org/uniprot/P10474 P10474]
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** [http://www.uniprot.org/uniprot/Q46002 Q46002]
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** [http://www.uniprot.org/uniprot/P16630 P16630]
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** [http://www.uniprot.org/uniprot/Q59241 Q59241]
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** [http://www.uniprot.org/uniprot/P13933 P13933]
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** [http://www.uniprot.org/uniprot/P07985 P07985]
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** [http://www.uniprot.org/uniprot/P19570 P19570]
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** [http://www.uniprot.org/uniprot/P20847 P20847]
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** [http://www.uniprot.org/uniprot/P23549 P23549]
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** [http://www.uniprot.org/uniprot/P23550 P23550]
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** [http://www.uniprot.org/uniprot/P19487 P19487]
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** [http://www.uniprot.org/uniprot/P16218 P16218]
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** [http://www.uniprot.org/uniprot/P23340 P23340]
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** [http://www.uniprot.org/uniprot/Q01409 Q01409]
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** [http://www.uniprot.org/uniprot/O67401 O67401]
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** [http://www.uniprot.org/uniprot/Q7M4T4 Q7M4T4]
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** [http://www.uniprot.org/uniprot/P28622 P28622]
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** [http://www.uniprot.org/uniprot/P94622 P94622]
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** [http://www.uniprot.org/uniprot/Q45554 Q45554]
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** [http://www.uniprot.org/uniprot/Q59963 Q59963]
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** [http://www.uniprot.org/uniprot/P54937 P54937]
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** [http://www.uniprot.org/uniprot/Q03882 Q03882]
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** [http://www.uniprot.org/uniprot/P10475 P10475]
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** [http://www.uniprot.org/uniprot/P10477 P10477]
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** [http://www.uniprot.org/uniprot/P04954 P04954]
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** [http://www.uniprot.org/uniprot/P04956 P04956]
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** [http://www.uniprot.org/uniprot/P04955 P04955]
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** [http://www.uniprot.org/uniprot/Q01786 Q01786]
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** [http://www.uniprot.org/uniprot/P26221 P26221]
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** [http://www.uniprot.org/uniprot/P29719 P29719]
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** [http://www.uniprot.org/uniprot/P06565 P06565]
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** [http://www.uniprot.org/uniprot/Q59290 Q59290]
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** [http://www.uniprot.org/uniprot/Q12714 Q12714]
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** [http://www.uniprot.org/uniprot/P17877 P17877]
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** [http://www.uniprot.org/uniprot/P29019 P29019]
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** [http://www.uniprot.org/uniprot/P16216 P16216]
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** [http://www.uniprot.org/uniprot/P17974 P17974]
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** [http://www.uniprot.org/uniprot/P26222 P26222]
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** [http://www.uniprot.org/uniprot/Q53324 Q53324]
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** [http://www.uniprot.org/uniprot/Q05332 Q05332]
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** [http://www.uniprot.org/uniprot/P23548 P23548]
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** [http://www.uniprot.org/uniprot/P06564 P06564]
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** [http://www.uniprot.org/uniprot/Q45532 Q45532]
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** [http://www.uniprot.org/uniprot/P07983 P07983]
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** [http://www.uniprot.org/uniprot/P07981 P07981]
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** [http://www.uniprot.org/uniprot/P06566 P06566]
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** [http://www.uniprot.org/uniprot/P07984 P07984]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Glycoside hydrolase, catalytic domain}}
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{{#set: common name=Glycoside hydrolase/deacetylase, beta/alpha-barrel}}
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{{#set: ec number=EC-3.2.1.4}}
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{{#set: gene associated=Ec-19_000430|Ec-08_004650|Ec-23_003530}}
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{{#set: in pathway=PWY-6788}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:16, 21 March 2018

Gene Ec-11_003800

  • left end position:
    • 3838128
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3843258
  • centisome position:
    • 61.022842
  • Synonym(s):
    • Esi_0234_0012
    • Esi0234_0012
    • flavin-containin

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-25_000240&oldid=17227"