Difference between revisions of "CPD-371"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4476 PWYQT-4476] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3699 TA...")
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4476 PWYQT-4476] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3699 TAX-3699]
 
* common name:
 
* common name:
−
** Bifidobacterium shunt
+
** indole glucosinolate breakdown (insect chewing induced)
 
* Synonym(s):
 
* Synonym(s):
−
** Bifidum fermentation
+
** glucosinolate activation
−
** Bifidum pathway
+
** glucosinolate degradation
−
** fructose-6-phosphate pathway
+
−
** Bifidum shunt
+
−
** glucose fermentation to lactate (Bifidobacteria)
+
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''12''' reactions found over '''15''' reactions in the full pathway
+
  '''1''' reactions found over '''14''' reactions in the full pathway
−
* [[1TRANSKETO-RXN]]
+
* [[RXN-1404]]
−
** 1 associated gene(s):
+
** 2 associated gene(s):
−
*** [[Ec-20_002600]]
+
*** [[Ec-01_002370]]
−
** 2 reconstruction source(s) associated:
+
*** [[Ec-26_000350]]
−
*** [[annotation-esiliculosus_genome]]
+
−
*** [[orthology-aragem]]
+
−
* [[2PGADEHYDRAT-RXN]]
+
−
** 3 associated gene(s):
+
−
*** [[Ec-27_004000]]
+
−
*** [[Ec-26_004120]]
+
−
*** [[Ec-14_005400]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
*** [[orthology-aragem]]
+
−
* [[3PGAREARR-RXN]]
+
−
** 7 associated gene(s):
+
−
*** [[Ec-24_002670]]
+
−
*** [[Ec-03_002170]]
+
−
*** [[Ec-27_000330]]
+
−
*** [[Ec-03_002160]]
+
−
*** [[Ec-01_000980]]
+
−
*** [[Ec-06_009930]]
+
−
*** [[Ec-10_005410]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
*** [[orthology-aragem]]
+
−
* [[GAPOXNPHOSPHN-RXN]]
+
−
** 4 associated gene(s):
+
−
*** [[Ec-25_003550]]
+
−
*** [[Ec-19_001850]]
+
−
*** [[Ec-19_003020]]
+
−
*** [[Ec-08_000500]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
*** [[orthology-aragem]]
+
−
* [[GLUCOKIN-RXN]]
+
−
** 1 associated gene(s):
+
−
*** [[Ec-27_005030]]
+
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
−
*** [[annotation-esiliculosus_genome]]
 
−
* [[L-LACTATE-DEHYDROGENASE-RXN]]
 
−
** 1 associated gene(s):
 
−
*** [[Ec-12_006780]]
 
−
** 1 reconstruction source(s) associated:
 
−
*** [[annotation-esiliculosus_genome]]
 
−
* [[PEPDEPHOS-RXN]]
 
−
** 3 associated gene(s):
 
−
*** [[Ec-26_004170]]
 
−
*** [[Ec-12_000950]]
 
−
*** [[Ec-06_006860]]
 
−
** 2 reconstruction source(s) associated:
 
−
*** [[annotation-esiliculosus_genome]]
 
−
*** [[orthology-aragem]]
 
−
* [[PGLUCISOM-RXN]]
 
−
** 3 associated gene(s):
 
−
*** [[Ec-24_002470]]
 
−
*** [[Ec-13_003530]]
 
−
*** [[Ec-13_003810]]
 
−
** 1 reconstruction source(s) associated:
 
−
*** [[annotation-esiliculosus_genome]]
 
−
* [[PHOSGLYPHOS-RXN]]
 
−
** 6 associated gene(s):
 
−
*** [[Ec-12_004530]]
 
−
*** [[Ec-01_001350]]
 
−
*** [[Ec-08_002400]]
 
−
*** [[Ec-12_004550]]
 
−
*** [[Ec-21_005710]]
 
−
*** [[Ec-21_004220]]
 
−
** 2 reconstruction source(s) associated:
 
−
*** [[annotation-esiliculosus_genome]]
 
−
*** [[orthology-aragem]]
 
−
* [[RIB5PISOM-RXN]]
 
−
** 1 associated gene(s):
 
−
*** [[Ec-08_003540]]
 
−
** 2 reconstruction source(s) associated:
 
−
*** [[annotation-esiliculosus_genome]]
 
−
*** [[orthology-aragem]]
 
−
* [[RIBULP3EPIM-RXN]]
 
−
** 2 associated gene(s):
 
−
*** [[Ec-07_002390]]
 
−
*** [[Ec-27_003930]]
 
−
** 2 reconstruction source(s) associated:
 
−
*** [[annotation-esiliculosus_genome]]
 
−
*** [[orthology-aragem]]
 
−
* [[TRANSALDOL-RXN]]
 
−
** 2 associated gene(s):
 
−
*** [[Ec-01_002780]]
 
−
*** [[Ec-06_003940]]
 
−
** 2 reconstruction source(s) associated:
 
−
*** [[annotation-esiliculosus_genome]]
 
 
*** [[orthology-aragem]]
 
*** [[orthology-aragem]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=ACETATEKIN-RXN ACETATEKIN-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12205 RXN-12205]
−
* [http://metacyc.org/META/NEW-IMAGE?object=FRUCTOSE-6-PHOSPHATE-PHOSPHOKETOLASE-RXN FRUCTOSE-6-PHOSPHATE-PHOSPHOKETOLASE-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12206 RXN-12206]
−
* [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOKETOLASE-RXN PHOSPHOKETOLASE-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12207 RXN-12207]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1444 RXN-1444]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4350 RXNQT-4350]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4351 RXNQT-4351]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4352 RXNQT-4352]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4353 RXNQT-4353]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4354 RXNQT-4354]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4355 RXNQT-4355]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4356 RXNQT-4356]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4357 RXNQT-4357]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4358 RXNQT-4358]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-201174}}
+
{{#set: taxonomic range=TAX-3699}}
−
{{#set: common name=Bifidobacterium shunt}}
+
{{#set: common name=indole glucosinolate breakdown (insect chewing induced)}}
−
{{#set: common name=Bifidum fermentation|Bifidum pathway|fructose-6-phosphate pathway|Bifidum shunt|glucose fermentation to lactate (Bifidobacteria)}}
+
{{#set: common name=glucosinolate activation|glucosinolate degradation}}
−
{{#set: reaction found=12}}
+
{{#set: reaction found=1}}
−
{{#set: total reaction=15}}
+
{{#set: total reaction=14}}
−
{{#set: completion rate=80.0}}
+
{{#set: completion rate=7.0}}

Revision as of 13:36, 21 March 2018

Pathway PWYQT-4476

  • taxonomic range:
  • common name:
    • indole glucosinolate breakdown (insect chewing induced)
  • Synonym(s):
    • glucosinolate activation
    • glucosinolate degradation

Reaction(s) found

1 reactions found over 14 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-371&oldid=20054"