Difference between revisions of "3-HYDROHYDROXYPHOSPHORYLPYRUVATE"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISOCITDEH-RXN ISOCITDEH-RXN] == * direction: ** REVERSIBLE * common name: ** isocitrate dehydrogena...")
(Created page with "Category:Gene == Gene Ec-24_004170 == * left end position: ** 4637962 * transcription direction: ** POSITIVE * right end position: ** 4656067 * centisome position: ** 92.9...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISOCITDEH-RXN ISOCITDEH-RXN] ==
+
== Gene Ec-24_004170 ==
−
* direction:
+
* left end position:
−
** REVERSIBLE
+
** 4637962
−
* common name:
+
* transcription direction:
−
** isocitrate dehydrogenase (NADP+)
+
** POSITIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/1.1.1.42 EC-1.1.1.42]
+
** 4656067
 +
* centisome position:
 +
** 92.98852   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0109_0017
 +
** Esi0109_0017
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[ATPASE-RXN]]
−
** 1 [[NADP]][c] '''+''' 1 [[THREO-DS-ISO-CITRATE]][c] '''<=>''' 1 [[NADPH]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
−
* With common name(s):
+
−
** 1 NADP+[c] '''+''' 1 D-threo-isocitrate[c] '''<=>''' 1 NADPH[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 CO2[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-11_003080]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
== Pathways  ==
+
−
* [[FERMENTATION-PWY]], mixed acid fermentation: [http://metacyc.org/META/NEW-IMAGE?object=FERMENTATION-PWY FERMENTATION-PWY]
+
−
** '''8''' reactions found over '''16''' reactions in the full pathway
+
−
* [[PWY-5913]], partial TCA cycle (obligate autotrophs): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913]
+
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
−
* [[REDCITCYC]], TCA cycle VIII (helicobacter): [http://metacyc.org/META/NEW-IMAGE?object=REDCITCYC REDCITCYC]
+
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-7268]], NAD/NADP-NADH/NADPH cytosolic interconversion (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7268 PWY-7268]
+
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
−
* [[P23-PWY]], reductive TCA cycle I: [http://metacyc.org/META/NEW-IMAGE?object=P23-PWY P23-PWY]
+
−
** '''10''' reactions found over '''12''' reactions in the full pathway
+
−
* [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase): [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY]
+
−
** '''9''' reactions found over '''11''' reactions in the full pathway
+
−
* [[PWY-6969]], TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6969 PWY-6969]
+
−
** '''10''' reactions found over '''12''' reactions in the full pathway
+
−
* [[PWY-6728]], methylaspartate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6728 PWY-6728]
+
−
** '''11''' reactions found over '''18''' reactions in the full pathway
+
−
* [[PWY-6549]], L-glutamine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6549 PWY-6549]
+
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-7254]], TCA cycle VII (acetate-producers): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7254 PWY-7254]
+
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-7124]], ethylene biosynthesis V (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7124 PWY-7124]
+
−
** '''8''' reactions found over '''10''' reactions in the full pathway
+
−
* [[TCA]], TCA cycle I (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=TCA TCA]
+
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: go-term
 +
* Reaction: [[TCX8]]
 +
** Source: [[orthology-aragem]]
 +
== Pathways associated ==
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: left end position=4637962}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00267 R00267]
+
{{#set: transcription direction=POSITIVE}}
−
* PIR:
+
{{#set: right end position=4656067}}
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A10759 A10759]
+
{{#set: centisome position=92.98852    }}
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A43294 A43294]
+
{{#set: common name=Esi_0109_0017|Esi0109_0017}}
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A43934 A43934]
+
{{#set: reaction associated=ATPASE-RXN|TCX8}}
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A49341 A49341]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A54756 A54756]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A55591 A55591]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=B49341 B49341]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C64523 C64523]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C81399 C81399]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DCBYIS DCBYIS]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DCECIS DCECIS]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G69330 G69330]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H64389 H64389]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H81877 H81877]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H86708 H86708]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I40382 I40382]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I40719 I40719]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4600 JC4600]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S28423 S28423]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S33612 S33612]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S33859 S33859]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S47013 S47013]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S51419 S51419]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S57499 S57499]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S62921 S62921]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S65065 S65065]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S74684 S74684]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T04355 T04355]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T04356 T04356]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T07402 T07402]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T09619 T09619]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T39058 T39058]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T44658 T44658]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T46280 T46280]
+
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P16100 P16100]
+
−
** [http://www.uniprot.org/uniprot/P33198 P33198]
+
−
** [http://www.uniprot.org/uniprot/P41561 P41561]
+
−
** [http://www.uniprot.org/uniprot/P41562 P41562]
+
−
** [http://www.uniprot.org/uniprot/P50214 P50214]
+
−
** [http://www.uniprot.org/uniprot/P41560 P41560]
+
−
** [http://www.uniprot.org/uniprot/P56063 P56063]
+
−
** [http://www.uniprot.org/uniprot/Q9PHY3 Q9PHY3]
+
−
** [http://www.uniprot.org/uniprot/P21954 P21954]
+
−
** [http://www.uniprot.org/uniprot/P08200 P08200]
+
−
** [http://www.uniprot.org/uniprot/O29610 O29610]
+
−
** [http://www.uniprot.org/uniprot/Q9JUV7 Q9JUV7]
+
−
** [http://www.uniprot.org/uniprot/Q9CHQ4 Q9CHQ4]
+
−
** [http://www.uniprot.org/uniprot/P39126 P39126]
+
−
** [http://www.uniprot.org/uniprot/P50216 P50216]
+
−
** [http://www.uniprot.org/uniprot/P50215 P50215]
+
−
** [http://www.uniprot.org/uniprot/Q04467 Q04467]
+
−
** [http://www.uniprot.org/uniprot/P50217 P50217]
+
−
** [http://www.uniprot.org/uniprot/P41939 P41939]
+
−
** [http://www.uniprot.org/uniprot/P48735 P48735]
+
−
** [http://www.uniprot.org/uniprot/P53982 P53982]
+
−
** [http://www.uniprot.org/uniprot/P50218 P50218]
+
−
** [http://www.uniprot.org/uniprot/O65853 O65853]
+
−
** [http://www.uniprot.org/uniprot/Q40345 Q40345]
+
−
** [http://www.uniprot.org/uniprot/O14254 O14254]
+
−
** [http://www.uniprot.org/uniprot/O75874 O75874]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=isocitrate dehydrogenase (NADP+)}}
+
−
{{#set: ec number=EC-1.1.1.42}}
+
−
{{#set: gene associated=Ec-11_003080}}
+
−
{{#set: in pathway=FERMENTATION-PWY|PWY-5913|REDCITCYC|PWY-7268|P23-PWY|P105-PWY|PWY-6969|PWY-6728|PWY-6549|PWY-7254|PWY-7124|TCA}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 13:49, 21 March 2018

Gene Ec-24_004170

  • left end position:
    • 4637962
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4656067
  • centisome position:
    • 92.98852
  • Synonym(s):
    • Esi_0109_0017
    • Esi0109_0017

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=3-HYDROHYDROXYPHOSPHORYLPYRUVATE&oldid=21903"