Difference between revisions of "HOMOGENTISATE-12-DIOXYGENASE-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6598 PWY-6598] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-131567 TAX-...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOGENTISATE-12-DIOXYGENASE-RXN HOMOGENTISATE-12-DIOXYGENASE-RXN] == * direction: ** LEFT-TO-RIGHT...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6598 PWY-6598] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOGENTISATE-12-DIOXYGENASE-RXN HOMOGENTISATE-12-DIOXYGENASE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-131567 TAX-131567]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** sciadonate biosynthesis
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** homogentisate 1,2-dioxygenase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.13.11.5 EC-1.13.11.5]
 
* Synonym(s):
 
* Synonym(s):
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** 5,11,14-eicosatrienoic acid biosynthesis
 
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** 5,11,14-eicosatrienoate biosynthesis
 
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** sciadonic acid biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''4''' reactions found over '''5''' reactions in the full pathway
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* With identifiers:
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* [[RXN-16094]]
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** 1 [[HOMOGENTISATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[4-MALEYL-ACETOACETATE]][c] '''+''' 1 [[PROTON]][c]
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** 0 associated gene:
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* With common name(s):
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** 1 reconstruction source(s) associated:
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** 1 homogentisate[c] '''+''' 1 oxygen[c] '''=>''' 1 4-maleyl-acetoacetate[c] '''+''' 1 H+[c]
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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* [[RXN-16095]]
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== Genes associated with this reaction  ==
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** 0 associated gene:
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Genes have been associated with this reaction based on different elements listed below.
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** 1 reconstruction source(s) associated:
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* Gene: [[Ec-17_003830]]
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN-16096]]
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*** Assignment: GO-TERM
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** 0 associated gene:
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== Pathways  ==
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** 1 reconstruction source(s) associated:
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* [[TYRFUMCAT-PWY]], L-tyrosine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=TYRFUMCAT-PWY TYRFUMCAT-PWY]
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[RXN-16097]]
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== Reconstruction information  ==
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** 0 associated gene:
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* Category: [[annotation]]
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-esiliculosus_genome]]
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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*** Tool: [[pathwaytools]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11677 RXN-11677]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-131567}}
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* RHEA:
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{{#set: common name=sciadonate biosynthesis}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15449 15449]
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{{#set: common name=5,11,14-eicosatrienoic acid biosynthesis|5,11,14-eicosatrienoate biosynthesis|sciadonic acid biosynthesis}}
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* LIGAND-RXN:
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{{#set: reaction found=4}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02519 R02519]
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{{#set: total reaction=5}}
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* UNIPROT:
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{{#set: completion rate=80.0}}
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** [http://www.uniprot.org/uniprot/Q9Y041 Q9Y041]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=homogentisate 1,2-dioxygenase}}
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{{#set: ec number=EC-1.13.11.5}}
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{{#set: gene associated=Ec-17_003830}}
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{{#set: in pathway=TYRFUMCAT-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:01, 21 March 2018

Reaction HOMOGENTISATE-12-DIOXYGENASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • homogentisate 1,2-dioxygenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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