Difference between revisions of "RXN-12400"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRNUTRANSHYDROGEN-RXN PYRNUTRANSHYDROGEN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** N...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12400 RXN-12400] == * direction: ** LEFT-TO-RIGHT * common name: ** xyloglucan XLLG oligosaccha...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRNUTRANSHYDROGEN-RXN PYRNUTRANSHYDROGEN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12400 RXN-12400] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** NAD(P)+ transhydrogenase (AB-specific)
+
** xyloglucan XLLG oligosaccharide β-galactosidase
−
** NAD(P) transhydrogenase, alpha subunit
+
** Beta-galactosidase, family GH2
 +
** Glycoside hydrolase-type carbohydrate-binding, subgroup
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.6.1.2 EC-1.6.1.2]
+
** [http://enzyme.expasy.org/EC/3.2.1.23 EC-3.2.1.23]
−
** [http://enzyme.expasy.org/EC/1.6.1.3 EC-1.6.1.3]
+
−
** [http://enzyme.expasy.org/EC/1.6.1.1 EC-1.6.1.1]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NADPH]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[NADP]][c]
+
** 1 [[CPD-13378]][c] '''+''' 2 [[WATER]][c] '''=>''' 2 [[D-galactopyranose]][c] '''+''' 1 [[CPD-13375]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NADPH[c] '''+''' 1 NAD+[c] '''=>''' 1 NADH[c] '''+''' 1 NADP+[c]
+
** 1 XLLG xyloglucan oligosaccharide[c] '''+''' 2 H2O[c] '''=>''' 2 D-galactopyranose[c] '''+''' 1 XXXG xyloglucan oligosaccharide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-01_007000]]
+
* Gene: [[Ec-12_007000]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[Ec-21_003320]]
+
* Gene: [[Ec-06_001410]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: GO-TERM
+
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5083]], NAD/NADH phosphorylation and dephosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5083 PWY-5083]
+
* [[PWY-6807]], xyloglucan degradation II (exoglucanase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6807 PWY-6807]
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 34: Line 33:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11692 11692]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00112 R00112]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9JUR5 Q9JUR5]
 
−
** [http://www.uniprot.org/uniprot/Q9JUR3 Q9JUR3]
 
−
** [http://www.uniprot.org/uniprot/P11024 P11024]
 
−
** [http://www.uniprot.org/uniprot/P07001 P07001]
 
−
** [http://www.uniprot.org/uniprot/P0AB67 P0AB67]
 
−
** [http://www.uniprot.org/uniprot/P43842 P43842]
 
−
** [http://www.uniprot.org/uniprot/P43010 P43010]
 
−
** [http://www.uniprot.org/uniprot/Q61941 Q61941]
 
−
** [http://www.uniprot.org/uniprot/P73500 P73500]
 
−
** [http://www.uniprot.org/uniprot/P73496 P73496]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=NAD(P)+ transhydrogenase (AB-specific)}}
+
{{#set: common name=xyloglucan XLLG oligosaccharide β-galactosidase}}
−
{{#set: common name=NAD(P) transhydrogenase, alpha subunit}}
+
{{#set: common name=Beta-galactosidase, family GH2}}
−
{{#set: ec number=EC-1.6.1.2}}
+
{{#set: common name=Glycoside hydrolase-type carbohydrate-binding, subgroup}}
−
{{#set: ec number=EC-1.6.1.3}}
+
{{#set: ec number=EC-3.2.1.23}}
−
{{#set: ec number=EC-1.6.1.1}}
+
{{#set: gene associated=Ec-12_007000|Ec-06_001410}}
−
{{#set: gene associated=Ec-01_007000|Ec-21_003320}}
+
{{#set: in pathway=PWY-6807}}
−
{{#set: in pathway=PWY-5083}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:03, 21 March 2018

Reaction RXN-12400

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • xyloglucan XLLG oligosaccharide β-galactosidase
    • Beta-galactosidase, family GH2
    • Glycoside hydrolase-type carbohydrate-binding, subgroup
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 XLLG xyloglucan oligosaccharide[c] + 2 H2O[c] => 2 D-galactopyranose[c] + 1 XXXG xyloglucan oligosaccharide[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6807, xyloglucan degradation II (exoglucanase): PWY-6807
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-12400&oldid=24167"