Difference between revisions of "Ec-21 005910"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11737 RXN-11737] == * direction: ** REVERSIBLE * common name: ** Aspartate Aminotransferase **...")
(Created page with "Category:Gene == Gene Ec-21_005910 == * left end position: ** 6816528 * transcription direction: ** POSITIVE * right end position: ** 6823667 * centisome position: ** 92.3...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11737 RXN-11737] ==
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== Gene Ec-21_005910 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 6816528
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* common name:
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* transcription direction:
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** Aspartate Aminotransferase
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** POSITIVE
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** aspartate aminotransferase
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* right end position:
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** Pyridoxal phosphate-dependent transferase, major region, subdomain 1
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** 6823667
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.6.1.1 EC-2.6.1.1]
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** 92.36339   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0014_0115
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** Esi0014_0115
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
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** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-CYSTEATE]][c] '''<=>''' 1 [[CPD-380]][c] '''+''' 1 [[GLT]][c]
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* With common name(s):
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** 1 2-oxoglutarate[c] '''+''' 1 L-cysteate[c] '''<=>''' 1 3-sulfopyruvate[c] '''+''' 1 L-glutamate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-03_003270]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-01_007480]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-23_003500]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-6638]], sulfolactate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6638 PWY-6638]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6643]], coenzyme M biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6643 PWY-6643]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6642]], (R)-cysteate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6642 PWY-6642]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=6816528}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02433 R02433]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=REVERSIBLE}}
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{{#set: right end position=6823667}}
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{{#set: common name=Aspartate Aminotransferase}}
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{{#set: centisome position=92.36339    }}
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{{#set: common name=aspartate aminotransferase}}
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{{#set: common name=Esi_0014_0115|Esi0014_0115}}
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{{#set: common name=Pyridoxal phosphate-dependent transferase, major region, subdomain 1}}
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{{#set: reaction associated=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}}
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{{#set: ec number=EC-2.6.1.1}}
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{{#set: gene associated=Ec-03_003270|Ec-01_007480|Ec-23_003500}}
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{{#set: in pathway=PWY-6638|PWY-6643|PWY-6642}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:30, 21 March 2018

Gene Ec-21_005910

  • left end position:
    • 6816528
  • transcription direction:
    • POSITIVE
  • right end position:
    • 6823667
  • centisome position:
    • 92.36339
  • Synonym(s):
    • Esi_0014_0115
    • Esi0014_0115

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-21_005910&oldid=27341"