Difference between revisions of "Ec-21 004100"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=O-SUCCHOMOSERLYASE-RXN O-SUCCHOMOSERLYASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [ht...")
(Created page with "Category:Gene == Gene Ec-21_004100 == * left end position: ** 5063794 * transcription direction: ** POSITIVE * right end position: ** 5072147 * centisome position: ** 68.6...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=O-SUCCHOMOSERLYASE-RXN O-SUCCHOMOSERLYASE-RXN] ==
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== Gene Ec-21_004100 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5063794
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.5.1.48 EC-2.5.1.48]
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** POSITIVE
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* right end position:
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** 5072147
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* centisome position:
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** 68.61399   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0383_0015
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** Esi0383_0015
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-12086]]
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** 1 [[O-SUCCINYL-L-HOMOSERINE]][c] '''+''' 1 [[CYS]][c] '''=>''' 1 [[L-CYSTATHIONINE]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 O-succinyl-L-homoserine[c] '''+''' 1 L-cysteine[c] '''=>''' 1 L-cystathionine[c] '''+''' 1 succinate[c] '''+''' 1 H+[c]
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* Reaction: [[RXN-12579]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: go-term
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[TRIACYLGLYCEROL-LIPASE-RXN]]
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* Gene: [[Ec-12_003100]]
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** Source: [[annotation-esiliculosus_genome]]
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** Source: [[orthology-aragem]]
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*** Assignment: go-term
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== Pathways  ==
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== Pathways associated ==
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* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-METSYN-PWY HOMOSER-METSYN-PWY]
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* [[LIPAS-PWY]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6857]]
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=5063794}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20397 20397]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=5072147}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03260 R03260]
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{{#set: centisome position=68.61399    }}
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* UNIPROT:
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{{#set: common name=Esi_0383_0015|Esi0383_0015}}
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** [http://www.uniprot.org/uniprot/P0A4K2 P0A4K2]
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{{#set: reaction associated=RXN-12086|RXN-12579|TRIACYLGLYCEROL-LIPASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q9CEC6 Q9CEC6]
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{{#set: pathway associated=LIPAS-PWY|PWY-6857}}
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** [http://www.uniprot.org/uniprot/P38675 P38675]
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** [http://www.uniprot.org/uniprot/P24601 P24601]
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** [http://www.uniprot.org/uniprot/P00935 P00935]
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** [http://www.uniprot.org/uniprot/O04981 O04981]
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** [http://www.uniprot.org/uniprot/O04982 O04982]
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** [http://www.uniprot.org/uniprot/O81334 O81334]
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** [http://www.uniprot.org/uniprot/Q79VD9 Q79VD9]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-2.5.1.48}}
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{{#set: gene associated=Ec-12_003100}}
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{{#set: in pathway=HOMOSER-METSYN-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:44, 21 March 2018

Gene Ec-21_004100

  • left end position:
    • 5063794
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5072147
  • centisome position:
    • 68.61399
  • Synonym(s):
    • Esi_0383_0015
    • Esi0383_0015

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-21_004100&oldid=29081"