Difference between revisions of "GBBTNabc"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLYCDx GLYCDx] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycerol dehydrogenase * Synonym(...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GBBTNabc GBBTNabc] == * direction: ** LEFT-TO-RIGHT * common name: ** Gamma butyrobetaine transport...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/GLYCDx GLYCDx] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GBBTNabc GBBTNabc] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Glycerol dehydrogenase
+
** Gamma butyrobetaine transport in via ABC system
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[glyc]][c] '''+''' 1.0 [[nad]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[dha]][c] '''+''' 1.0 [[nadh]][c]
+
** 1.0 [[atp]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[gbbtn]][e] '''=>''' 1.0 [[gbbtn]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[adp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Glycerol[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c] '''=>''' 1.0 H+[c] '''+''' 1.0 Dihydroxyacetone[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c]
+
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 Gamma-butyrobetaine[e] '''=>''' 1.0 Gamma-butyrobetaine[c] '''+''' 1.0 H+[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 ADP C10H12N5O10P2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1358]]
+
* Gene: [[EF0864]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* Gene: [[EF0862]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* Gene: [[EF0863]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* Gene: [[EF0865]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map00640]]: [http://www.genome.jp/dbget-bin/www_bget?map00640 map00640]
 
−
** '''15''' reactions found over '''143''' reactions in the full pathway
 
−
* [[map00561]]: [http://www.genome.jp/dbget-bin/www_bget?map00561 map00561]
 
−
** '''7''' reactions found over '''83''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* MetaNetX (MNX) Equation : MNXR100052
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13769 13769]
+
−
* BioCyc : META:GLYCDEH-RXN
+
−
* MetaNetX (MNX) Equation : MNXR100326
+
−
* KEGG Reaction : R01034
+
−
* EC Number : 1.1.1.6
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Glycerol dehydrogenase}}
+
{{#set: common name=Gamma butyrobetaine transport in via ABC system}}
−
{{#set: gene associated=EF1358}}
+
{{#set: gene associated=EF0864|EF0862|EF0863|EF0865}}
−
{{#set: in pathway=map01100|map00640|map00561}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}
 

Latest revision as of 15:24, 21 March 2018

Reaction GBBTNabc

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Gamma butyrobetaine transport in via ABC system
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 H2O H2O[c] + 1.0 Gamma-butyrobetaine[e] => 1.0 Gamma-butyrobetaine[c] + 1.0 H+[c] + 1.0 Phosphate[c] + 1.0 ADP C10H12N5O10P2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR100052




Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=GBBTNabc&oldid=10011"