Difference between revisions of "DURIPP"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map04070 map04070] == * common_name: ** Phosphatidylinositol signaling system * Synonym(s): == Reacti...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DURIPP DURIPP] == * direction: ** REVERSIBLE * common name: ** Deoxyuridine phosphorylase * Synonym...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map04070 map04070] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/DURIPP DURIPP] ==
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* common_name:
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* direction:
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** Phosphatidylinositol signaling system
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** REVERSIBLE
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* common name:
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** Deoxyuridine phosphorylase
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''8''' reactions found over '''21''' reactions in the full pathway
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* With identifiers:
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* [[DASYN120]]
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** 1.0 [[duri]][c] '''+''' 1.0 [[pi]][c] '''<=>''' 1.0 [[2dr1p]][c] '''+''' 1.0 [[ura]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[EF2494]]
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** 1.0 Deoxyuridine[c] '''+''' 1.0 Phosphate[c] '''<=>''' 1.0 2-Deoxy-D-ribose 1-phosphate[c] '''+''' 1.0 Uracil[c]
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** 1 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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== Genes associated with this reaction  ==
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* [[DASYN140]]
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Genes have been associated with this reaction based on different elements listed below.
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** 1 associated gene(s):
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* Gene: [[EF0173]]
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*** [[EF2494]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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** 1 reconstruction source(s) associated:
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** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* Gene: [[EF0187]]
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* [[DASYN141]]
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** Source: [[orthology-l_plantarum_wcfs1]]
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** 1 associated gene(s):
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[EF2494]]
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== Pathways  ==
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** 1 reconstruction source(s) associated:
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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** '''460''' reactions found over '''2349''' reactions in the full pathway
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* [[DASYN160]]
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* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
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** 1 associated gene(s):
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** '''82''' reactions found over '''244''' reactions in the full pathway
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*** [[EF2494]]
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* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
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** 1 reconstruction source(s) associated:
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** '''22''' reactions found over '''72''' reactions in the full pathway
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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== Reconstruction information  ==
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* [[DASYN161]]
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* Category: [[orthology]]
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** 1 associated gene(s):
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[EF2494]]
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*** Tool: [[pantograph]]
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** 1 reconstruction source(s) associated:
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** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** Tool: [[pantograph]]
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* [[DASYN180]]
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** Source: [[orthology-l_plantarum_wcfs1]]
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** 1 associated gene(s):
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*** Tool: [[pantograph]]
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*** [[EF2494]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* [[DASYN181]]
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** 1 associated gene(s):
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*** [[EF2494]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* [[MI1PP]]
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** 1 associated gene(s):
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*** [[EF2461]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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== Reaction(s) not found ==
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* [http://bigg.ucsd.edu/universal/reactions/DAGK160 DAGK160]
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* [http://bigg.ucsd.edu/universal/reactions/DAGK160h DAGK160h]
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* [http://bigg.ucsd.edu/universal/reactions/DASYN_HP DASYN_HP]
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* [http://bigg.ucsd.edu/universal/reactions/IBPHn IBPHn]
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* [http://bigg.ucsd.edu/universal/reactions/MI134P4P MI134P4P]
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* [http://bigg.ucsd.edu/universal/reactions/MI134PK MI134PK]
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* [http://bigg.ucsd.edu/universal/reactions/MI134PP MI134PP]
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* [http://bigg.ucsd.edu/universal/reactions/MI13PP MI13PP]
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* [http://bigg.ucsd.edu/universal/reactions/MI14PP MI14PP]
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* [http://bigg.ucsd.edu/universal/reactions/MI34PP MI34PP]
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* [http://bigg.ucsd.edu/universal/reactions/MI3PP MI3PP]
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* [http://bigg.ucsd.edu/universal/reactions/MI4PP MI4PP]
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* [http://bigg.ucsd.edu/universal/reactions/PMI12346PS PMI12346PS]
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== External links  ==
 
== External links  ==
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{{#set: common_name=Phosphatidylinositol signaling system}}
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* RHEA:
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{{#set: reaction found=8}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22824 22824]
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{{#set: total reaction=21}}
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* BioCyc : META:URA-PHOSPH-RXN
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{{#set: completion rate=38.0}}
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* MetaNetX (MNX) Equation : MNXR97818
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* KEGG Reaction : R02484
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* EC Number : 2.4.2.1
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Deoxyuridine phosphorylase}}
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{{#set: gene associated=EF0173|EF0187}}
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{{#set: in pathway=map01100|map00240|map00983}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:25, 21 March 2018

Reaction DURIPP

  • direction:
    • REVERSIBLE
  • common name:
    • Deoxyuridine phosphorylase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Deoxyuridine[c] + 1.0 Phosphate[c] <=> 1.0 2-Deoxy-D-ribose 1-phosphate[c] + 1.0 Uracil[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:URA-PHOSPH-RXN
  • MetaNetX (MNX) Equation : MNXR97818
  • KEGG Reaction : R02484
  • EC Number : 2.4.2.1




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