Difference between revisions of "GRTT"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DADNK DADNK] == * direction: ** LEFT-TO-RIGHT * common name: ** Deoxyadenosine kinase * Synonym(s):...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GRTT GRTT] == * direction: ** LEFT-TO-RIGHT * common name: ** Geranyltranstransferase * Synonym(s):...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/DADNK DADNK] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GRTT GRTT] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Deoxyadenosine kinase
+
** Geranyltranstransferase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[dad_2]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[damp]][c]
+
** 1.0 [[ipdp]][c] '''+''' 1.0 [[grdp]][c] '''=>''' 1.0 [[ppi]][c] '''+''' 1.0 [[frdp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Deoxyadenosine[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c] '''+''' 1.0 DAMP C10H12N5O6P[c]
+
** 1.0 Isopentenyl diphosphate[c] '''+''' 1.0 Geranyl diphosphate[c] '''=>''' 1.0 Diphosphate[c] '''+''' 1.0 Farnesyl diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF0740]]
+
* Gene: [[EF0981]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
+
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
−
** '''97''' reactions found over '''298''' reactions in the full pathway
+
** '''135''' reactions found over '''694''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00900]]: [http://www.genome.jp/dbget-bin/www_bget?map00900 map00900]
 +
** '''14''' reactions found over '''67''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[l_plantarum_wcfs1]]
+
*** Tool: [[pantograph]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* EC Number : 2.5.1.10
 +
* BioCyc : META:FPPSYN-RXN
 +
* MetaNetX (MNX) Equation : MNXR99634
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23452 23452]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19361 19361]
−
* BioCyc : META:DEOXYADENOSINE-KINASE-RXN
+
* Reactome : REACT_R-ATH-191303
−
* MetaNetX (MNX) Equation : MNXR97079
+
* KEGG Reaction : R02003
−
* KEGG Reaction : R02089
+
−
* EC Number : 2.7.1.145
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Deoxyadenosine kinase}}
+
{{#set: common name=Geranyltranstransferase}}
−
{{#set: gene associated=EF0740}}
+
{{#set: gene associated=EF0981}}
−
{{#set: in pathway=map01100|map00230}}
+
{{#set: in pathway=map01100|map01130|map01110|map00900}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
 

Latest revision as of 15:25, 21 March 2018

Reaction GRTT

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Geranyltranstransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Isopentenyl diphosphate[c] + 1.0 Geranyl diphosphate[c] => 1.0 Diphosphate[c] + 1.0 Farnesyl diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 2.5.1.10
  • BioCyc : META:FPPSYN-RXN
  • MetaNetX (MNX) Equation : MNXR99634
  • RHEA:
  • Reactome : REACT_R-ATH-191303
  • KEGG Reaction : R02003




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