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| Line 1: |
Line 1: |
| − | [[Category:Pathway]] | + | [[Category:Metabolite]] |
| − | == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00710 map00710] == | + | == Metabolite [http://bigg.ucsd.edu/universal/metabolites/f6p f6p] == |
| − | * common_name: | + | * common name: |
| − | ** Carbon fixation in photosynthetic organisms | + | ** D-Fructose 6-phosphate |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction(s) found == | + | == Reaction(s) known to consume the compound == |
| − | '''16''' reactions found over '''71''' reactions in the full pathway
| + | * [[PFK]] |
| − | * [[ALATA_L]] | + | * [[PKETF]] |
| − | ** 3 associated gene(s):
| + | * [[GF6PTA]] |
| − | *** [[EF2372]]
| + | == Reaction(s) known to produce the compound == |
| − | *** [[EF1314]]
| + | * [[G6PDA]] |
| − | *** [[EF1706]]
| + | |
| − | ** 1 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | * [[ASPTA]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[EF2372]]
| + | |
| − | ** 2 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | |
| − | * [[FBA]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[EF1167]]
| + | |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | |
| − | * [[FBA2]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[EF1167]]
| + | |
| − | ** 1 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| | * [[FBP]] | | * [[FBP]] |
| − | ** 1 associated gene(s):
| + | * [[FRUpts2]] |
| − | *** [[EF1503]]
| + | * [[HEX7]] |
| − | ** 1 reconstruction source(s) associated:
| + | == Reaction(s) of unknown directionality == |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | * [[GAPD]]
| + | |
| − | ** 2 associated gene(s):
| + | |
| − | *** [[EF1526]]
| + | |
| − | *** [[EF1964]]
| + | |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | |
| − | * [[GAPDi_nadp]]
| + | |
| − | ** 2 associated gene(s):
| + | |
| − | *** [[EF1964]]
| + | |
| − | *** [[EF1526]]
| + | |
| − | ** 1 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | * [[MDH]]
| + | |
| − | ** 3 associated gene(s):
| + | |
| − | *** [[EF0641]]
| + | |
| − | *** [[EF0255]]
| + | |
| − | *** [[EF0388]]
| + | |
| − | ** 2 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | |
| − | * [[ME1]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[EF3316]]
| + | |
| − | ** 2 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | |
| − | * [[ME2]]
| + | |
| − | ** 2 associated gene(s):
| + | |
| − | *** [[EF1206]]
| + | |
| − | *** [[EF3316]]
| + | |
| − | ** 2 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | * [[PGK]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[EF1963]]
| + | |
| − | ** 2 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | |
| − | * [[RPE]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[EF3118]]
| + | |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | |
| − | * [[RPI]]
| + | |
| − | ** 3 associated gene(s):
| + | |
| − | *** [[EF0197]]
| + | |
| − | *** [[EF1835]]
| + | |
| − | *** [[EF1834]]
| + | |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | |
| − | * [[TKT1]]
| + | |
| − | ** 0 associated gene:
| + | |
| − | ** 1 reconstruction source(s) associated:
| + | |
| − | *** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
| + | |
| | * [[TKT2]] | | * [[TKT2]] |
| − | ** 0 associated gene:
| + | * [[MAN6PI]] |
| − | ** 1 reconstruction source(s) associated:
| + | * [[PGI]] |
| − | *** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
| + | * [[F6PA]] |
| − | * [[TPI]] | + | * [[TALA]] |
| − | ** 1 associated gene(s):
| + | * [[M1PD]] |
| − | *** [[EF1962]]
| + | * [[SBTPD]] |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | |
| − | == Reaction(s) not found ==
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/3SALATAi 3SALATAi]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/3SALATAim 3SALATAim]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/AATC AATC]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/AATG AATG]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/AATGm AATGm]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/ALATA_Lm ALATA_Lm]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/ASPATh ASPATh]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/ASPTAm ASPTAm]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/ASPTAp ASPTAp]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/BFBP BFBP]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/BFBPh BFBPh]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/FBA3 FBA3]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/FBA3hi FBA3hi]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/FBAf FBAf]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/FBAh FBAh]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/FBAm FBAm]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/FPGPL FPGPL]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/GAPDH_nadp_hi GAPDH_nadp_hi]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/GAPDHf GAPDHf]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/GAPDHh GAPDHh]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/GAPDHm GAPDHm]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/LCYSTAT LCYSTAT]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/LCYSTATm LCYSTATm]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/MDHC_nadp_hr MDHC_nadp_hr]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/MDH_nadp_fi MDH_nadp_fi]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/MDH_nadp_hi MDH_nadp_hi]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/MDHf MDHf]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/MDHh MDHh]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/MDHi2 MDHi2]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/MDHm MDHm]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/MDHp MDHp]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/MDHy MDHy]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/ME1m ME1m]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/ME2m ME2m]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/PGKf PGKf]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/PGKh PGKh]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/PGKm PGKm]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/PPC PPC]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/PPCK PPCK]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/PPCKm PPCKm]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/PPDK PPDK]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/PPDKh PPDKh]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/PRUK PRUK]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/PRUK_1 PRUK_1]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/RBCh RBCh]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/RBCh_1 RBCh_1]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/RBPC RBPC]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/RBPCh RBPCh]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/RPEh RPEh]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/RPIh RPIh]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/SBP SBP]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/SBP_1 SBP_1]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/TKT1h TKT1h]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/TKT2h TKT2h]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/TPIh TPIh]
| + | |
| | == External links == | | == External links == |
| − | {{#set: common_name=Carbon fixation in photosynthetic organisms}} | + | {{#set: common name=D-Fructose 6-phosphate}} |
| − | {{#set: reaction found=16}} | + | {{#set: consumed by=PFK|PKETF|GF6PTA}} |
| − | {{#set: total reaction=71}} | + | {{#set: produced by=G6PDA|FBP|FRUpts2|HEX7}} |
| − | {{#set: completion rate=23.0}} | + | {{#set: reversible reaction associated=TKT2|MAN6PI|PGI|F6PA|TALA|M1PD|SBTPD}} |
