Difference between revisions of "XYLK"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DADNK DADNK] == * direction: ** LEFT-TO-RIGHT * common name: ** Deoxyadenosine kinase * Synonym(s):...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/XYLK XYLK] == * direction: ** LEFT-TO-RIGHT * common name: ** Xylulokinase * Synonym(s): == Reacti...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/DADNK DADNK] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/XYLK XYLK] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Deoxyadenosine kinase
+
** Xylulokinase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[dad_2]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[damp]][c] '''+''' 1.0 [[h]][c]
+
** 1.0 [[atp]][c] '''+''' 1.0 [[xylu__D]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[xu5p__D]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Deoxyadenosine[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 DAMP C10H12N5O6P[c] '''+''' 1.0 H+[c]
+
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 D-Xylulose[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c] '''+''' 1.0 D-Xylulose 5-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF0740]]
+
* Gene: [[EF0557]]
** [[pantograph]]-[[l_plantarum_wcfs1]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
** '''508''' reactions found over '''2349''' reactions in the full pathway
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
+
* [[map00040]]: [http://www.genome.jp/dbget-bin/www_bget?map00040 map00040]
** '''98''' reactions found over '''298''' reactions in the full pathway
+
** '''15''' reactions found over '''54''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
*** [[l_plantarum_wcfs1]]
+
*** Tool: [[pantograph]]
*** [[b_subtilis_subsp_subtilis_str168]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* EC Number : 2.7.1.17
 +
* BioCyc : META:XYLULOKIN-RXN
 +
* MetaNetX (MNX) Equation : MNXR105255
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23452 23452]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10964 10964]
* BioCyc : META:DEOXYADENOSINE-KINASE-RXN
+
* Reactome : REACT_R-ATH-5662466
* MetaNetX (MNX) Equation : MNXR97079
+
* KEGG Reaction : R01639
* KEGG Reaction : R02089
+
* EC Number : 2.7.1.145
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Deoxyadenosine kinase}}
+
{{#set: common name=Xylulokinase}}
{{#set: gene associated=EF0740}}
+
{{#set: gene associated=EF0557}}
{{#set: in pathway=map01100|map00230}}
+
{{#set: in pathway=map01100|map00040}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
 

Latest revision as of 15:26, 21 March 2018

Reaction XYLK

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Xylulokinase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 D-Xylulose[c] => 1.0 ADP C10H12N5O10P2[c] + 1.0 H+[c] + 1.0 D-Xylulose 5-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 2.7.1.17
  • BioCyc : META:XYLULOKIN-RXN
  • MetaNetX (MNX) Equation : MNXR105255
  • RHEA:
  • Reactome : REACT_R-ATH-5662466
  • KEGG Reaction : R01639