Difference between revisions of "CHLabc"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLUR GLUR] == * direction: ** REVERSIBLE * common name: ** Glutamate racemase * Synonym(s): == Rea...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CHLabc CHLabc] == * direction: ** LEFT-TO-RIGHT * common name: ** Choline transport via ABC system...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/GLUR GLUR] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/CHLabc CHLabc] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Glutamate racemase
+
** Choline transport via ABC system
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[glu__D]][c] '''<=>''' 1.0 [[glu__L]][c]
+
** 1.0 [[chol]][e] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[pi]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[chol]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 D-Glutamate[c] '''<=>''' 1.0 L-Glutamate[c]
+
** 1.0 Choline C5H14NO[e] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 Phosphate[c] '''+''' 1.0 H+[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 Choline C5H14NO[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1121]]
+
* Gene: [[EF0862]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
* Gene: [[EF0674]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
* Gene: [[EF0864]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* Gene: [[EF0675]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
* Gene: [[EF0865]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* Gene: [[EF0863]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map00471]]: [http://www.genome.jp/dbget-bin/www_bget?map00471 map00471]
 
−
** '''4''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12813 12813]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=38715#1 38715#1]
−
* BioCyc : META:GLUTRACE-RXN
+
* MetaNetX (MNX) Equation : MNXR96691
−
* MetaNetX (MNX) Equation : MNXR100288
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* KEGG Reaction : R00260
+
{{#set: common name=Choline transport via ABC system}}
−
* EC Number : 5.1.1.3
+
{{#set: gene associated=EF0862|EF0674|EF0864|EF0675|EF0865|EF0863}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: in pathway=}}
−
{{#set: common name=Glutamate racemase}}
+
−
{{#set: gene associated=EF1121}}
+
−
{{#set: in pathway=map01100|map00471}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
+
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:26, 21 March 2018

Reaction CHLabc

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Choline transport via ABC system
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Choline C5H14NO[e] + 1.0 H2O H2O[c] + 1.0 ATP C10H12N5O13P3[c] => 1.0 Phosphate[c] + 1.0 H+[c] + 1.0 ADP C10H12N5O10P2[c] + 1.0 Choline C5H14NO[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR96691




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