Difference between revisions of "TransportSeed cit"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/LDH_L LDH_L] == * direction: ** REVERSIBLE * common name: ** L-lactate dehydrogenase * Synonym(s):...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TransportSeed_cit TransportSeed_cit] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Fo...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/LDH_L LDH_L] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/TransportSeed_cit TransportSeed_cit] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* common name:
+
−
** L-lactate dehydrogenase
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[nad]][c] '''+''' 1.0 [[lac__L]][c] '''<=>''' 1.0 [[h]][c] '''+''' 1.0 [[nadh]][c] '''+''' 1.0 [[pyr]][c]
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** 1.0 [[cit]][e] '''=>''' 1.0 [[cit]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 L-Lactate[c] '''<=>''' 1.0 H+[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 Pyruvate[c]
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** 1.0 Citrate[e] '''=>''' 1.0 Citrate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[EF0255]]
 
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''179''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map00640]]: [http://www.genome.jp/dbget-bin/www_bget?map00640 map00640]
 
−
** '''15''' reactions found over '''143''' reactions in the full pathway
 
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
−
** '''104''' reactions found over '''715''' reactions in the full pathway
 
−
* [[map00270]]: [http://www.genome.jp/dbget-bin/www_bget?map00270 map00270]
 
−
** '''25''' reactions found over '''135''' reactions in the full pathway
 
−
* [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
 
−
** '''31''' reactions found over '''163''' reactions in the full pathway
 
−
* [[map00010]]: [http://www.genome.jp/dbget-bin/www_bget?map00010 map00010]
 
−
** '''24''' reactions found over '''149''' reactions in the full pathway
 
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
−
** '''135''' reactions found over '''694''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[manual]]
−
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
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** Source: [[manual-import_from_medium]]
−
*** Tool: [[pantograph]]
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*** Comment: [[added to manage seeds from extracellular to cytosol compartment]]
−
** Source: [[orthology-l_plantarum_wcfs1]]
+
−
*** Tool: [[pantograph]]
+
 
== External links  ==
 
== External links  ==
−
* EC Number : 1.1.1.27
+
{{#set: direction=LEFT-TO-RIGHT}}
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* BioCyc : META:L-LACTATE-DEHYDROGENASE-RXN
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{{#set: in pathway=}}
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* MetaNetX (MNX) Equation : MNXR101040
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{{#set: reconstruction category=manual}}
−
* RHEA:
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{{#set: reconstruction source=manual-import_from_medium}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23444 23444]
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{{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}}
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* Reactome : REACT_R-ATH-6807826
+
−
* KEGG Reaction : R00703
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=L-lactate dehydrogenase}}
+
−
{{#set: gene associated=EF0255}}
+
−
{{#set: in pathway=map01100|map01110|map00640|map01120|map00270|map00620|map00010|map01130}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
+
−
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 16:27, 21 March 2018

Reaction TransportSeed_cit

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Citrate[e] => 1.0 Citrate[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=TransportSeed_cit&oldid=10285"