Difference between revisions of "OGMEACPD"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLYTRS GLYTRS] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycyl-tRNA synthetase * Synonym(...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/OGMEACPD OGMEACPD] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-Oxo-glutaryl-[ACP] methyl e...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/GLYTRS GLYTRS] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/OGMEACPD OGMEACPD] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Glycyl-tRNA synthetase
+
** 3-Oxo-glutaryl-[ACP] methyl ester dehydratase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[trnagly]][c] '''+''' 1.0 [[gly]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[glytrna]][c] '''+''' 1.0 [[ppi]][c] '''+''' 1.0 [[amp]][c]
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** 1.0 [[hgmeACP]][c] '''=>''' 1.0 [[h2o]][c] '''+''' 1.0 [[egmeACP]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 TRNA(Gly)[c] '''+''' 1.0 Glycine[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 Glycyl-tRNA(Gly)[c] '''+''' 1.0 Diphosphate[c] '''+''' 1.0 AMP C10H12N5O7P[c]
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** 1.0 3-Hydroxyglutaryl-[acyl-carrier protein] methyl ester[c] '''=>''' 1.0 H2O H2O[c] '''+''' 1.0 Enoylglutaryl-[acyl-carrier protein] methyl ester[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF2407]]
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* Gene: [[EF2878]]
** [[pantograph]]-[[l_plantarum_wcfs1]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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* Gene: [[EF0284]]
* [[EF2406]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
** [[pantograph]]-[[l_plantarum_wcfs1]]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
 
== Pathways  ==
 
== Pathways  ==
* [[map00970]]: [http://www.genome.jp/dbget-bin/www_bget?map00970 map00970]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
** '''23''' reactions found over '''49''' reactions in the full pathway
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** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00780]]: [http://www.genome.jp/dbget-bin/www_bget?map00780 map00780]
 +
** '''26''' reactions found over '''67''' reactions in the full pathway
 +
* [[map00061]]: [http://www.genome.jp/dbget-bin/www_bget?map00061 map00061]
 +
** '''65''' reactions found over '''160''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
*** Tool: [[pantograph]]
 
** Source: [[orthology-l_plantarum_wcfs1]]
 
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* Reactome : REACT_R-HSA-380048
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* BioCyc : META:RXN-11477
* MetaNetX (MNX) Equation : MNXR100365
+
* MetaNetX (MNX) Equation : MNXR102159
* KEGG Reaction : R03654
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* KEGG Reaction : R10117
* EC Number : 6.1.1.14
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* EC Number : 4.2.1.59
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Glycyl-tRNA synthetase}}
+
{{#set: common name=3-Oxo-glutaryl-[ACP] methyl ester dehydratase}}
{{#set: gene associated=EF2407|EF2406}}
+
{{#set: gene associated=EF2878|EF0284}}
{{#set: in pathway=map00970}}
+
{{#set: in pathway=map01100|map00780|map00061}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-l_plantarum_wcfs1}}
+
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:29, 21 March 2018

Reaction OGMEACPD

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-Oxo-glutaryl-[ACP] methyl ester dehydratase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 3-Hydroxyglutaryl-[acyl-carrier protein] methyl ester[c] => 1.0 H2O H2O[c] + 1.0 Enoylglutaryl-[acyl-carrier protein] methyl ester[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • BioCyc : META:RXN-11477
  • MetaNetX (MNX) Equation : MNXR102159
  • KEGG Reaction : R10117
  • EC Number : 4.2.1.59
"3-Oxo-glutaryl-[ACP] methyl ester dehydratase" cannot be used as a page name in this wiki.