Difference between revisions of "AICART"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PDH PDH] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyruvate dehydrogenase * Synonym(s): =...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/AICART AICART] == * direction: ** REVERSIBLE * common name: ** Phosphoribosylaminoimidazolecarboxam...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/PDH PDH] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/AICART AICART] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Pyruvate dehydrogenase
+
** Phosphoribosylaminoimidazolecarboxamide formyltransferase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[nad]][c] '''+''' 1.0 [[coa]][c] '''+''' 1.0 [[pyr]][c] '''=>''' 1.0 [[accoa]][c] '''+''' 1.0 [[nadh]][c] '''+''' 1.0 [[co2]][c]
+
** 1.0 [[aicar]][c] '''+''' 1.0 [[10fthf]][c] '''<=>''' 1.0 [[fprica]][c] '''+''' 1.0 [[thf]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 Coenzyme A[c] '''+''' 1.0 Pyruvate[c] '''=>''' 1.0 Acetyl-CoA[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 CO2 CO2[c]
+
** 1.0 5-Amino-1-(5-Phospho-D-ribosyl)imidazole-4-carboxamide[c] '''+''' 1.0 10-Formyltetrahydrofolate[c] '''<=>''' 1.0 5-Formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide[c] '''+''' 1.0 5,6,7,8-Tetrahydrofolate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1353]]
+
* Gene: [[EF1778]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
* [[EF1355]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
−
* [[EF1356]]
+
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
−
* [[EF1354]]
+
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''179''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
−
** '''104''' reactions found over '''715''' reactions in the full pathway
 
−
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 
−
** '''45''' reactions found over '''220''' reactions in the full pathway
 
−
* [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
 
−
** '''31''' reactions found over '''163''' reactions in the full pathway
 
−
* [[map00010]]: [http://www.genome.jp/dbget-bin/www_bget?map00010 map00010]
 
−
** '''24''' reactions found over '''149''' reactions in the full pathway
 
−
* [[map00020]]: [http://www.genome.jp/dbget-bin/www_bget?map00020 map00020]
 
−
** '''4''' reactions found over '''70''' reactions in the full pathway
 
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
** '''135''' reactions found over '''694''' reactions in the full pathway
 
** '''135''' reactions found over '''694''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00670]]: [http://www.genome.jp/dbget-bin/www_bget?map00670 map00670]
 +
** '''14''' reactions found over '''65''' reactions in the full pathway
 +
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 +
** '''97''' reactions found over '''298''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[l_plantarum_wcfs1]]
+
*** Tool: [[pantograph]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* EC Number : 1.2.1
 
−
* BioCyc : META:PYRUVDEH-RXN
 
−
* MetaNetX (MNX) Equation : MNXR102425
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28042 28042]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22192 22192]
−
* Reactome : REACT_R-ATH-71397
+
* Reactome : REACT_R-ATH-73798
−
* KEGG Reaction : R00209
+
* MetaNetX (MNX) Equation : MNXR95639
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* KEGG Reaction : R04560
−
{{#set: common name=Pyruvate dehydrogenase}}
+
* EC Number : 2.1.2.3
−
{{#set: gene associated=EF1353|EF1355|EF1356|EF1354}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: in pathway=map01100|map01110|map01120|map01200|map00620|map00010|map00020|map01130}}
+
{{#set: common name=Phosphoribosylaminoimidazolecarboxamide formyltransferase}}
 +
{{#set: gene associated=EF1778}}
 +
{{#set: in pathway=map01100|map01130|map01110|map00670|map00230}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
 

Latest revision as of 15:30, 21 March 2018

Reaction AICART

  • direction:
    • REVERSIBLE
  • common name:
    • Phosphoribosylaminoimidazolecarboxamide formyltransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 5-Amino-1-(5-Phospho-D-ribosyl)imidazole-4-carboxamide[c] + 1.0 10-Formyltetrahydrofolate[c] <=> 1.0 5-Formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide[c] + 1.0 5,6,7,8-Tetrahydrofolate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • Reactome : REACT_R-ATH-73798
  • MetaNetX (MNX) Equation : MNXR95639
  • KEGG Reaction : R04560
  • EC Number : 2.1.2.3




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