Difference between revisions of "PAPPT3"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_gln__L ExchangeSeed_gln__L] == * direction: ** REVERSIBLE * Synonym(s): == Reaction F...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PAPPT3 PAPPT3] == * direction: ** LEFT-TO-RIGHT * common name: ** Phospho-N-acetylmuramoyl-pentapep...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_gln__L ExchangeSeed_gln__L] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PAPPT3 PAPPT3] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** Phospho-N-acetylmuramoyl-pentapeptide-transferase (meso-2,6-diaminopimelate)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[gln__L]][C-BOUNDARY] '''<=>''' 1.0 [[gln__L]][e]
+
** 1.0 [[ugmda]][c] '''+''' 1.0 [[udcpp]][c] '''=>''' 1.0 [[uagmda]][c] '''+''' 1.0 [[ump]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 L-Glutamine[C-BOUNDARY] '''<=>''' 1.0 L-Glutamine[e]
+
** 1.0 UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] '''+''' 1.0 Undecaprenyl phosphate[c] '''=>''' 1.0 Undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] '''+''' 1.0 UMP C9H11N2O9P[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[EF0992]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00550]]: [http://www.genome.jp/dbget-bin/www_bget?map00550 map00550]
 +
** '''10''' reactions found over '''27''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[manual]]:
+
* Category: [[orthology]]
** [[added to manage seeds from boundary to extracellular compartment]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: direction=REVERSIBLE}}
+
* MetaNetX (MNX) Equation : MNXR102373
{{#set: in pathway=}}
+
* EC Number : 2.7.8.13
{{#set: reconstruction category=manual}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: reconstruction source=added to manage seeds from boundary to extracellular compartment}}
+
{{#set: common name=Phospho-N-acetylmuramoyl-pentapeptide-transferase (meso-2,6-diaminopimelate)}}
 +
{{#set: gene associated=EF0992}}
 +
{{#set: in pathway=map01100|map00550}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:30, 21 March 2018

Reaction PAPPT3

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phospho-N-acetylmuramoyl-pentapeptide-transferase (meso-2,6-diaminopimelate)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] + 1.0 Undecaprenyl phosphate[c] => 1.0 Undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] + 1.0 UMP C9H11N2O9P[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR102373
  • EC Number : 2.7.8.13