Difference between revisions of "AIRC2"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/BZDH BZDH] == * direction: ** REVERSIBLE * common name: ** Benzaldehyde dehydrogenase * Synonym(s):...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/AIRC2 AIRC2] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphoribosylaminoimidazole carbox...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/BZDH BZDH] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/AIRC2 AIRC2] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Benzaldehyde dehydrogenase
+
** Phosphoribosylaminoimidazole carboxylase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[nad]][c] '''+''' 1.0 [[bzal]][c] '''+''' 1.0 [[h2o]][c] '''<=>''' 1.0 [[nadh]][c] '''+''' 2.0 [[h]][c] '''+''' 1.0 [[bz]][c]
+
** 1.0 [[hco3]][c] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[air]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[5caiz]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 Benzaldehyde[c] '''+''' 1.0 H2O H2O[c] '''<=>''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 2.0 H+[c] '''+''' 1.0 Benzoate[c]
+
** 1.0 Bicarbonate[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 5-amino-1-(5-phospho-D-ribosyl)imidazole[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 5-phosphoribosyl-5-carboxyaminoimidazole[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[EF1786]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
* Gene: [[EF2362]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map01220]]: [http://www.genome.jp/dbget-bin/www_bget?map01220 map01220]
+
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
−
** '''2''' reactions found over '''60''' reactions in the full pathway
+
** '''135''' reactions found over '''694''' reactions in the full pathway
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
+
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
−
** '''104''' reactions found over '''715''' reactions in the full pathway
+
** '''179''' reactions found over '''1054''' reactions in the full pathway
−
* [[map00627]]: [http://www.genome.jp/dbget-bin/www_bget?map00627 map00627]
+
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
−
** '''2''' reactions found over '''42''' reactions in the full pathway
+
** '''97''' reactions found over '''298''' reactions in the full pathway
−
* [[map00622]]: [http://www.genome.jp/dbget-bin/www_bget?map00622 map00622]
+
−
** '''2''' reactions found over '''32''' reactions in the full pathway
+
−
* [[map00623]]: [http://www.genome.jp/dbget-bin/www_bget?map00623 map00623]
+
−
** '''1''' reactions found over '''51''' reactions in the full pathway
+
−
* [[map00350]]: [http://www.genome.jp/dbget-bin/www_bget?map00350 map00350]
+
−
** '''9''' reactions found over '''102''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[gap-filling]]
+
* Category: [[orthology]]
−
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** Tool: [[meneco]]
+
*** Tool: [[pantograph]]
−
**** Comment: [[added for gapfilling]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11840 11840]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19317 19317]
−
* EC Number : 1.2.1.28
+
* MetaNetX (MNX) Equation : MNXR95644
−
* MetaNetX (MNX) Equation : MNXR96365
+
* EC Number : 6.3.4.18
−
* KEGG Reaction : R01419
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* BioCyc : META:BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN
+
{{#set: common name=Phosphoribosylaminoimidazole carboxylase}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: gene associated=EF1786|EF2362}}
−
{{#set: common name=Benzaldehyde dehydrogenase}}
+
{{#set: in pathway=map01100|map01130|map01110|map00230}}
−
{{#set: in pathway=map01100|map01220|map01120|map00627|map00622|map00623|map00350}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
−
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=meneco}}
+
−
{{#set: reconstruction comment=added for gapfilling}}
+

Latest revision as of 16:30, 21 March 2018

Reaction AIRC2

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phosphoribosylaminoimidazole carboxylase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Bicarbonate[c] + 1.0 ATP C10H12N5O13P3[c] + 1.0 5-amino-1-(5-phospho-D-ribosyl)imidazole[c] => 1.0 ADP C10H12N5O10P2[c] + 1.0 5-phosphoribosyl-5-carboxyaminoimidazole[c] + 1.0 Phosphate[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR95644
  • EC Number : 6.3.4.18




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