Difference between revisions of "CITL"

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(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/murein5p4p murein5p4p] == * common name: ** Two linked disacharide pentapeptide and tetrapept...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CITL CITL] == * direction: ** LEFT-TO-RIGHT * common name: ** Citrate lyase * Synonym(s): == React...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://bigg.ucsd.edu/universal/metabolites/murein5p4p murein5p4p] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/CITL CITL] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** Two linked disacharide pentapeptide and tetrapeptide murein units (uncrosslinked, middle of chain)
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** Citrate lyase
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[MDDCP4ppc]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1.0 [[cit]][c] '''=>''' 1.0 [[oaa]][c] '''+''' 1.0 [[ac]][c]
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* [[MDDCP3ppc]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1.0 Citrate[c] '''=>''' 1.0 Oxaloacetate[c] '''+''' 1.0 Acetate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[EF3321]]
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** Source: [[orthology-l_plantarum_wcfs1]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* Gene: [[EF3320]]
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** Source: [[orthology-l_plantarum_wcfs1]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* Gene: [[EF3319]]
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** Source: [[orthology-l_plantarum_wcfs1]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* Gene: [[EF3318]]
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** Source: [[orthology-l_plantarum_wcfs1]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* Gene: [[EF3315]]
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** Source: [[orthology-l_plantarum_wcfs1]]
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* Gene: [[EF3322]]
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** Source: [[orthology-l_plantarum_wcfs1]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-l_plantarum_wcfs1]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=Two linked disacharide pentapeptide and tetrapeptide murein units (uncrosslinked, middle of chain)}}
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* RHEA:
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{{#set: consumed by=MDDCP4ppc}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10760 10760]
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{{#set: produced by=MDDCP3ppc}}
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* BioCyc : META:CITLY-RXN
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* MetaNetX (MNX) Equation : MNXR96731
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* KEGG Reaction : R00362
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* EC Number : 4.1.3.6
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Citrate lyase}}
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{{#set: gene associated=EF3321|EF3320|EF3319|EF3318|EF3315|EF3322}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-l_plantarum_wcfs1}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:35, 21 March 2018

Reaction CITL

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Citrate lyase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Citrate[c] => 1.0 Oxaloacetate[c] + 1.0 Acetate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:CITLY-RXN
  • MetaNetX (MNX) Equation : MNXR96731
  • KEGG Reaction : R00362
  • EC Number : 4.1.3.6




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