Difference between revisions of "PPGPPDP"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/FFSD FFSD] == * direction: ** LEFT-TO-RIGHT * common name: ** Beta-fructofuranosidase * Synonym(s):...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PPGPPDP PPGPPDP] == * direction: ** LEFT-TO-RIGHT * common name: ** Guanosine-3',5'-bis(diphosphate...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/FFSD FFSD] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PPGPPDP PPGPPDP] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Beta-fructofuranosidase
+
** Guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[h2o]][c] '''+''' 1.0 [[suc6p]][c] '''=>''' 1.0 [[fru]][c] '''+''' 1.0 [[g6p]][c]
+
** 1.0 [[h2o]][c] '''+''' 1.0 [[ppgpp]][c] '''=>''' 1.0 [[ppi]][c] '''+''' 1.0 [[gdp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H2O H2O[c] '''+''' 1.0 Sucrose 6-phosphate[c] '''=>''' 1.0 D-Fructose[c] '''+''' 1.0 D-Glucose 6-phosphate[c]
+
** 1.0 H2O H2O[c] '''+''' 1.0 Guanosine 3',5'-bis(diphosphate)[c] '''=>''' 1.0 Diphosphate[c] '''+''' 1.0 GDP C10H12N5O11P2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1603]]
+
* Gene: [[EF1974]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
+
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
+
** '''97''' reactions found over '''298''' reactions in the full pathway
−
* [[map00500]]: [http://www.genome.jp/dbget-bin/www_bget?map00500 map00500]
+
−
** '''15''' reactions found over '''81''' reactions in the full pathway
+
−
* [[map00052]]: [http://www.genome.jp/dbget-bin/www_bget?map00052 map00052]
+
−
** '''17''' reactions found over '''67''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[l_plantarum_wcfs1]]
+
*** Tool: [[pantograph]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR99590
+
* RHEA:
−
* KEGG Reaction : R03921
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14253 14253]
−
* EC Number : 3.2.1.26
+
* BioCyc : META:PPGPPSYN-RXN
 +
* MetaNetX (MNX) Equation : MNXR103109
 +
* KEGG Reaction : R00336
 +
* EC Number : 3.1.7.2
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Beta-fructofuranosidase}}
+
{{#set: common name=Guanosine-3',5'-bis(diphosphate) 3'-diphosphatase}}
−
{{#set: gene associated=EF1603}}
+
{{#set: gene associated=EF1974}}
−
{{#set: in pathway=map01100|map00500|map00052}}
+
{{#set: in pathway=map00230}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
 

Latest revision as of 15:35, 21 March 2018

Reaction PPGPPDP

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H2O H2O[c] + 1.0 Guanosine 3',5'-bis(diphosphate)[c] => 1.0 Diphosphate[c] + 1.0 GDP C10H12N5O11P2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:PPGPPSYN-RXN
  • MetaNetX (MNX) Equation : MNXR103109
  • KEGG Reaction : R00336
  • EC Number : 3.1.7.2




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