Difference between revisions of "RNDR4"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/3ooctdACP 3ooctdACP] == * common name: ** 3-Oxooctadecanoyl-[acyl-carrier protein] * Synonym(...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/RNDR4 RNDR4] == * direction: ** LEFT-TO-RIGHT * common name: ** Ribonucleoside-diphosphate reductas...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/RNDR4 RNDR4] == |
| + | * direction: | ||
| + | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** Ribonucleoside-diphosphate reductase (UDP) |
* Synonym(s): | * Synonym(s): | ||
| − | == Reaction(s) | + | == Reaction Formula == |
| − | == | + | * With identifiers: |
| − | * [[ | + | ** 1.0 [[trdrd]][c] '''+''' 1.0 [[udp]][c] '''=>''' 1.0 [[trdox]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[dudp]][c] |
| − | * [[ | + | * With common name(s): |
| − | == | + | ** 1.0 Reduced thioredoxin[c] '''+''' 1.0 UDP C9H11N2O12P2[c] '''=>''' 1.0 Oxidized thioredoxin[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 DUDP C9H11N2O11P2[c] |
| − | * [[ | + | |
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[EF0470]] | ||
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
| + | * Gene: [[EF0472]] | ||
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
| + | * Gene: [[EF0471]] | ||
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
| + | == Pathways == | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''460''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240] | ||
| + | ** '''82''' reactions found over '''244''' reactions in the full pathway | ||
| + | * [[map00480]]: [http://www.genome.jp/dbget-bin/www_bget?map00480 map00480] | ||
| + | ** '''10''' reactions found over '''39''' reactions in the full pathway | ||
| + | * [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230] | ||
| + | ** '''97''' reactions found over '''298''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| − | {{#set: common name= | + | * BioCyc : META:UDPREDUCT-RXN |
| − | {{#set: | + | * MetaNetX (MNX) Equation : MNXR104066 |
| − | {{#set: | + | * KEGG Reaction : R02018 |
| + | * EC Number : 1.17.4.1 | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=Ribonucleoside-diphosphate reductase (UDP)}} | ||
| + | {{#set: gene associated=EF0470|EF0472|EF0471}} | ||
| + | {{#set: in pathway=map01100|map00240|map00480|map00230}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 15:37, 21 March 2018
Contents
Reaction RNDR4
- direction:
- LEFT-TO-RIGHT
- common name:
- Ribonucleoside-diphosphate reductase (UDP)
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 Reduced thioredoxin[c] + 1.0 UDP C9H11N2O12P2[c] => 1.0 Oxidized thioredoxin[c] + 1.0 H2O H2O[c] + 1.0 DUDP C9H11N2O11P2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
- map01100: map01100
- 460 reactions found over 2349 reactions in the full pathway
- map00240: map00240
- 82 reactions found over 244 reactions in the full pathway
- map00480: map00480
- 10 reactions found over 39 reactions in the full pathway
- map00230: map00230
- 97 reactions found over 298 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-b_subtilis_subsp_subtilis_str168
- Tool: pantograph
- Source: orthology-l_plantarum_wcfs1
- Tool: pantograph
- Source: orthology-b_subtilis_subsp_subtilis_str168
External links
- BioCyc : META:UDPREDUCT-RXN
- MetaNetX (MNX) Equation : MNXR104066
- KEGG Reaction : R02018
- EC Number : 1.17.4.1
