Difference between revisions of "ICHORS"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TransportSeed_thm TransportSeed_thm] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Fo...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ICHORS ICHORS] == * direction: ** REVERSIBLE * common name: ** Isochorismate synthase * Synonym(s):...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/TransportSeed_thm TransportSeed_thm] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ICHORS ICHORS] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* common name:
 +
** Isochorismate synthase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[thm]][e] '''=>''' 1.0 [[thm]][c]
+
** 1.0 [[chor]][c] '''<=>''' 1.0 [[ichor]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Thiamin[e] '''=>''' 1.0 Thiamin[c]
+
** 1.0 Chorismate[c] '''<=>''' 1.0 Isochorismate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[EF0447]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''135''' reactions found over '''694''' reactions in the full pathway
 +
* [[map00130]]: [http://www.genome.jp/dbget-bin/www_bget?map00130 map00130]
 +
** '''9''' reactions found over '''40''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map01053]]: [http://www.genome.jp/dbget-bin/www_bget?map01053 map01053]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[manual]]
+
* Category: [[orthology]]
** Source: [[manual-import_from_medium]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
*** Comment: [[added to manage seeds from extracellular to cytosol compartment]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
{{#set: in pathway=}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18985 18985]
{{#set: reconstruction category=manual}}
+
* BioCyc : META:ISOCHORSYN-RXN
{{#set: reconstruction source=manual-import_from_medium}}
+
* MetaNetX (MNX) Equation : MNXR100784
{{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}}
+
* KEGG Reaction : R01717
 +
* EC Number : 5.4.4.2
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Isochorismate synthase}}
 +
{{#set: gene associated=EF0447}}
 +
{{#set: in pathway=map01100|map01130|map00130|map01110|map01053}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:37, 21 March 2018

Reaction ICHORS

  • direction:
    • REVERSIBLE
  • common name:
    • Isochorismate synthase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Chorismate[c] <=> 1.0 Isochorismate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:ISOCHORSYN-RXN
  • MetaNetX (MNX) Equation : MNXR100784
  • KEGG Reaction : R01717
  • EC Number : 5.4.4.2