Difference between revisions of "TransportSeed ala L"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/RNDR4 RNDR4] == * direction: ** LEFT-TO-RIGHT * common name: ** Ribonucleoside-diphosphate reductas...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TransportSeed_ala__L TransportSeed_ala__L] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == React...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/RNDR4 RNDR4] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/TransportSeed_ala__L TransportSeed_ala__L] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** Ribonucleoside-diphosphate reductase (UDP)
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[udp]][c] '''+''' 1.0 [[trdrd]][c] '''=>''' 1.0 [[dudp]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[trdox]][c]
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** 1.0 [[ala__L]][e] '''=>''' 1.0 [[ala__L]][c]
 
* With common name(s):
 
* With common name(s):
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** 1.0 UDP C9H11N2O12P2[c] '''+''' 1.0 Reduced thioredoxin[c] '''=>''' 1.0 DUDP C9H11N2O11P2[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 Oxidized thioredoxin[c]
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** 1.0 L-Alanine[e] '''=>''' 1.0 L-Alanine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[EF0472]]
 
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
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* [[EF0471]]
 
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** [[pantograph]]-[[l_plantarum_wcfs1]]
 
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
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* [[EF0470]]
 
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** [[pantograph]]-[[l_plantarum_wcfs1]]
 
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
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** '''508''' reactions found over '''2349''' reactions in the full pathway
 
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* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 
−
** '''83''' reactions found over '''244''' reactions in the full pathway
 
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* [[map00480]]: [http://www.genome.jp/dbget-bin/www_bget?map00480 map00480]
 
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** '''11''' reactions found over '''39''' reactions in the full pathway
 
−
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
−
** '''98''' reactions found over '''298''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
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* Category: [[manual]]
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** [[pantograph]]:
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** Source: [[manual-import_from_medium]]
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*** [[l_plantarum_wcfs1]]
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*** Comment: [[added to manage seeds from extracellular to cytosol compartment]]
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*** [[b_subtilis_subsp_subtilis_str168]]
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== External links  ==
 
== External links  ==
−
* BioCyc : META:UDPREDUCT-RXN
 
−
* MetaNetX (MNX) Equation : MNXR104066
 
−
* KEGG Reaction : R02018
 
−
* EC Number : 1.17.4.1
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Ribonucleoside-diphosphate reductase (UDP)}}
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{{#set: in pathway=}}
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{{#set: gene associated=EF0472|EF0471|EF0470}}
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{{#set: reconstruction category=manual}}
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{{#set: in pathway=map01100|map00240|map00480|map00230}}
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{{#set: reconstruction source=manual-import_from_medium}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}}
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{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
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Latest revision as of 16:37, 21 March 2018

Reaction TransportSeed_ala__L

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Alanine[e] => 1.0 L-Alanine[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

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