Difference between revisions of "DCMPDA"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NDPK3 NDPK3] == * direction: ** REVERSIBLE * common name: ** Nucleoside-diphosphate kinase (ATP:CDP...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DCMPDA DCMPDA] == * direction: ** REVERSIBLE * common name: ** DCMP deaminase * Synonym(s): == Rea...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/NDPK3 NDPK3] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/DCMPDA DCMPDA] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** Nucleoside-diphosphate kinase (ATP:CDP)
+
** DCMP deaminase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[cdp]][c] '''+''' 1.0 [[atp]][c] '''<=>''' 1.0 [[adp]][c] '''+''' 1.0 [[ctp]][c]
+
** 1.0 [[h2o]][c] '''+''' 1.0 [[dcmp]][c] '''+''' 1.0 [[h]][c] '''<=>''' 1.0 [[nh4]][c] '''+''' 1.0 [[dump]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 CDP C9H12N3O11P2[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''<=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 CTP C9H12N3O14P3[c]
+
** 1.0 H2O H2O[c] '''+''' 1.0 DCMP C9H12N3O7P[c] '''+''' 1.0 H+[c] '''<=>''' 1.0 Ammonium[c] '''+''' 1.0 DUMP C9H11N2O8P[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF0228]]
+
* Gene: [[EF2448]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
* [[EF1036]]
+
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 
−
** '''82''' reactions found over '''244''' reactions in the full pathway
 
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
−
** '''179''' reactions found over '''1054''' reactions in the full pathway
+
** '''82''' reactions found over '''244''' reactions in the full pathway
−
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
+
−
** '''97''' reactions found over '''298''' reactions in the full pathway
+
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
+
−
** '''135''' reactions found over '''694''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
−
*** [[l_plantarum_wcfs1]]
+
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
 
== External links  ==
 
== External links  ==
 +
* EC Number : 3.5.4.12
 +
* BioCyc : META:DCMP-DEAMINASE-RXN
 +
* MetaNetX (MNX) Equation : MNXR97185
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25237 25237]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22924 22924]
−
* BioCyc : META:CDPKIN-RXN
+
* Reactome : REACT_R-ATH-73596
−
* MetaNetX (MNX) Equation : MNXR101936
+
* KEGG Reaction : R01663
−
* KEGG Reaction : R00570
+
−
* EC Number : 2.7.4.6
+
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=Nucleoside-diphosphate kinase (ATP:CDP)}}
+
{{#set: common name=DCMP deaminase}}
−
{{#set: gene associated=EF0228|EF1036}}
+
{{#set: gene associated=EF2448}}
−
{{#set: in pathway=map00240|map01100|map01110|map00230|map01130}}
+
{{#set: in pathway=map01100|map00240}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
 

Latest revision as of 15:38, 21 March 2018

Reaction DCMPDA

  • direction:
    • REVERSIBLE
  • common name:
    • DCMP deaminase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H2O H2O[c] + 1.0 DCMP C9H12N3O7P[c] + 1.0 H+[c] <=> 1.0 Ammonium[c] + 1.0 DUMP C9H11N2O8P[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 3.5.4.12
  • BioCyc : META:DCMP-DEAMINASE-RXN
  • MetaNetX (MNX) Equation : MNXR97185
  • RHEA:
  • Reactome : REACT_R-ATH-73596
  • KEGG Reaction : R01663




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