Difference between revisions of "CYSTA"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/BLUB BLUB] == * direction: ** LEFT-TO-RIGHT * common name: ** Cobalamin biosynthesis * Synonym(s):...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CYSTA CYSTA] == * direction: ** REVERSIBLE * common name: ** Cysteine transaminase * Synonym(s): =...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/BLUB BLUB] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/CYSTA CYSTA] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
** Cobalamin biosynthesis
+
** Cysteine transaminase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[fmnh2]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[o2]][c] '''=>''' 1.0 [[e4p]][c] '''+''' 1.0 [[dmbzid]][c] '''+''' 1.0 [[doxopa]][c] '''+''' 1.0 [[urea]][c]
+
** 1.0 [[cys__L]][c] '''+''' 1.0 [[akg]][c] '''<=>''' 1.0 [[glu__L]][c] '''+''' 1.0 [[mercppyr]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Reduced FMN[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 O2 O2[c] '''=>''' 1.0 D-Erythrose 4-phosphate[c] '''+''' 1.0 5,6-Dimethylbenzimidazole[c] '''+''' 1.0 1,2-Dioxopropanoic acid[c] '''+''' 1.0 Urea CH4N2O[c]
+
** 1.0 L-Cysteine[c] '''+''' 1.0 2-Oxoglutarate[c] '''<=>''' 1.0 L-Glutamate[c] '''+''' 1.0 Mercaptopyruvate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[EF2372]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00270]]: [http://www.genome.jp/dbget-bin/www_bget?map00270 map00270]
 +
** '''25''' reactions found over '''135''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[gap-filling]]
+
* Category: [[orthology]]
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
*** Tool: [[meneco]]
+
*** Tool: [[pantograph]]
**** Comment: [[added for gapfilling]]
+
 
== External links  ==
 
== External links  ==
* MetaNetX (MNX) Equation : MNXR96311
+
* RHEA:
{{#set: direction=LEFT-TO-RIGHT}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17441 17441]
{{#set: common name=Cobalamin biosynthesis}}
+
* BioCyc : META:CYSTEINE-AMINOTRANSFERASE-RXN
{{#set: in pathway=}}
+
* MetaNetX (MNX) Equation : MNXR96990
{{#set: reconstruction category=gap-filling}}
+
* KEGG Reaction : R00895
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
+
* EC Number : 2.6.1.1
{{#set: reconstruction tool=meneco}}
+
{{#set: direction=REVERSIBLE}}
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: common name=Cysteine transaminase}}
 +
{{#set: gene associated=EF2372}}
 +
{{#set: in pathway=map01100|map00270}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-l_plantarum_wcfs1}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:38, 21 March 2018

Reaction CYSTA

  • direction:
    • REVERSIBLE
  • common name:
    • Cysteine transaminase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Cysteine[c] + 1.0 2-Oxoglutarate[c] <=> 1.0 L-Glutamate[c] + 1.0 Mercaptopyruvate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:CYSTEINE-AMINOTRANSFERASE-RXN
  • MetaNetX (MNX) Equation : MNXR96990
  • KEGG Reaction : R00895
  • EC Number : 2.6.1.1