Difference between revisions of "BLUB"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TransportSeed_h2o TransportSeed_h2o] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Fo...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/BLUB BLUB] == * direction: ** LEFT-TO-RIGHT * common name: ** Cobalamin biosynthesis * Synonym(s):...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/TransportSeed_h2o TransportSeed_h2o] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/BLUB BLUB] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** Cobalamin biosynthesis
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[h2o]][e] '''=>''' 1.0 [[h2o]][c]
+
** 1.0 [[fmnh2]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[o2]][c] '''=>''' 1.0 [[e4p]][c] '''+''' 1.0 [[dmbzid]][c] '''+''' 1.0 [[doxopa]][c] '''+''' 1.0 [[urea]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 H2O H2O[e] '''=>''' 1.0 H2O H2O[c]
+
** 1.0 Reduced FMN[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 O2 O2[c] '''=>''' 1.0 D-Erythrose 4-phosphate[c] '''+''' 1.0 5,6-Dimethylbenzimidazole[c] '''+''' 1.0 1,2-Dioxopropanoic acid[c] '''+''' 1.0 Urea CH4N2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[manual]]:
+
* Category: [[gap-filling]]
** [[added to manage seeds from extracellular to cytosol compartment]]
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
 +
*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
 +
* MetaNetX (MNX) Equation : MNXR96311
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Cobalamin biosynthesis}}
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=gap-filling}}
{{#set: reconstruction source=added to manage seeds from extracellular to cytosol compartment}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
 +
{{#set: reconstruction tool=meneco}}
 +
{{#set: reconstruction comment=added for gapfilling}}

Latest revision as of 16:38, 21 March 2018

Reaction BLUB

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Cobalamin biosynthesis
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Reduced FMN[c] + 1.0 H2O H2O[c] + 1.0 O2 O2[c] => 1.0 D-Erythrose 4-phosphate[c] + 1.0 5,6-Dimethylbenzimidazole[c] + 1.0 1,2-Dioxopropanoic acid[c] + 1.0 Urea CH4N2O[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR96311