Difference between revisions of "CHORM"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MCMAT4_manual MCMAT4_manual] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula ==...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CHORM CHORM] == * direction: ** LEFT-TO-RIGHT * common name: ** Chorismate mutase * Synonym(s): ==...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/CHORM CHORM] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| + | * common name: | ||
| + | ** Chorismate mutase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[chor]][c] '''=>''' 1.0 [[pphn]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** | + | ** 1.0 Chorismate[c] '''=>''' 1.0 Prephenate[c] |
| + | |||
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[EF1562]] |
| − | ** | + | ** Source: [[orthology-l_plantarum_wcfs1]] |
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
| + | * Gene: [[EF1568]] | ||
| + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] | ||
== Pathways == | == Pathways == | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''460''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130] | ||
| + | ** '''135''' reactions found over '''694''' reactions in the full pathway | ||
| + | * [[map00400]]: [http://www.genome.jp/dbget-bin/www_bget?map00400 map00400] | ||
| + | ** '''13''' reactions found over '''59''' reactions in the full pathway | ||
| + | * [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110] | ||
| + | ** '''179''' reactions found over '''1054''' reactions in the full pathway | ||
| + | * [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230] | ||
| + | ** '''56''' reactions found over '''228''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[ | + | * Category: [[orthology]] |
| − | ** [[ | + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] |
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13897 13897] | ||
| + | * BioCyc : META:CHORISMATEMUT-RXN | ||
| + | * MetaNetX (MNX) Equation : MNXR96708 | ||
| + | * KEGG Reaction : R01715 | ||
| + | * EC Number : 5.4.99.5 | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=Chorismate mutase}} |
| − | {{#set: in pathway=}} | + | {{#set: gene associated=EF1562|EF1568}} |
| − | {{#set: reconstruction category= | + | {{#set: in pathway=map01100|map01130|map00400|map01110|map01230}} |
| − | {{#set: reconstruction source= | + | {{#set: reconstruction category=orthology}} |
| + | {{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 15:41, 21 March 2018
Contents
Reaction CHORM
- direction:
- LEFT-TO-RIGHT
- common name:
- Chorismate mutase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 Chorismate[c] => 1.0 Prephenate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
- map01100: map01100
- 460 reactions found over 2349 reactions in the full pathway
- map01130: map01130
- 135 reactions found over 694 reactions in the full pathway
- map00400: map00400
- 13 reactions found over 59 reactions in the full pathway
- map01110: map01110
- 179 reactions found over 1054 reactions in the full pathway
- map01230: map01230
- 56 reactions found over 228 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-e_coli_sstr_k12_substr_mg1655
- Tool: pantograph
- Source: orthology-b_subtilis_subsp_subtilis_str168
- Tool: pantograph
- Source: orthology-l_plantarum_wcfs1
- Tool: pantograph
- Source: orthology-e_coli_sstr_k12_substr_mg1655
External links
- RHEA:
- BioCyc : META:CHORISMATEMUT-RXN
- MetaNetX (MNX) Equation : MNXR96708
- KEGG Reaction : R01715
- EC Number : 5.4.99.5
