Difference between revisions of "URAt2pp copy1"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DURIK1 DURIK1] == * direction: ** LEFT-TO-RIGHT * common name: ** Deoxyuridine kinase (ATP:Deoxyuri...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/URAt2pp_copy1 URAt2pp_copy1] == * direction: ** LEFT-TO-RIGHT * common name: ** Uracil transport in...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/DURIK1 DURIK1] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/URAt2pp_copy1 URAt2pp_copy1] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Deoxyuridine kinase (ATP:Deoxyuridine)
+
** Uracil transport in via proton symport (periplasm)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[duri]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[dump]][c]
+
** 1.0 [[h]][p] '''+''' 1.0 [[ura]][p] '''=>''' 1.0 [[ura]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Deoxyuridine[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c] '''+''' 1.0 DUMP C9H11N2O8P[c]
+
** 1.0 H+[p] '''+''' 1.0 Uracil[p] '''=>''' 1.0 Uracil[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF2555]]
+
* Gene: [[EF1720]]
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 
** '''82''' reactions found over '''244''' reactions in the full pathway
 
* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
 
** '''22''' reactions found over '''72''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
*** [[l_plantarum_wcfs1]]
+
* Category: [[manual]]
*** [[b_subtilis_subsp_subtilis_str168]]
+
** Source: [[manual-curation_from_orthology]]
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28206 28206]
 
* BioCyc : META:DURIDKI-RXN
 
* MetaNetX (MNX) Equation : MNXR97817
 
* KEGG Reaction : R02099
 
* EC Number : 2.7.1.145
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Deoxyuridine kinase (ATP:Deoxyuridine)}}
+
{{#set: common name=Uracil transport in via proton symport (periplasm)}}
{{#set: gene associated=EF2555}}
+
{{#set: gene associated=EF1720}}
{{#set: in pathway=map01100|map00240|map00983}}
+
{{#set: in pathway=}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=orthology|manual}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|manual-curation_from_orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
 

Latest revision as of 15:41, 21 March 2018

Reaction URAt2pp_copy1

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Uracil transport in via proton symport (periplasm)
  • Synonym(s):

Reaction Formula

  • With identifiers:
    • 1.0 h[p] + 1.0 ura[p] => 1.0 ura[c] + 1.0 h[c]
  • With common name(s):
    • 1.0 H+[p] + 1.0 Uracil[p] => 1.0 Uracil[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links