Difference between revisions of "ICHORS copy2"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/HISTRS HISTRS] == * direction: ** LEFT-TO-RIGHT * common name: ** Histidyl-tRNA synthetase * Synony...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ICHORS_copy2 ICHORS_copy2] == * direction: ** LEFT-TO-RIGHT * common name: ** Isochorismate synthas...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/HISTRS HISTRS] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ICHORS_copy2 ICHORS_copy2] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Histidyl-tRNA synthetase
+
** Isochorismate synthase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[trnahis]][c] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[his__L]][c] '''=>''' 1.0 [[histrna]][c] '''+''' 1.0 [[ppi]][c] '''+''' 1.0 [[amp]][c]
+
** 1.0 [[chor]][c] '''=>''' 1.0 [[ichor]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 TRNA(His)[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 L-Histidine[c] '''=>''' 1.0 L-Histidyl-tRNA(His)[c] '''+''' 1.0 Diphosphate[c] '''+''' 1.0 AMP C10H12N5O7P[c]
+
** 1.0 Chorismate[c] '''=>''' 1.0 Isochorismate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF1971]]
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* Gene: [[EF0447]]
** [[pantograph]]-[[l_plantarum_wcfs1]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
 
== Pathways  ==
 
== Pathways  ==
* [[map00970]]: [http://www.genome.jp/dbget-bin/www_bget?map00970 map00970]
 
** '''23''' reactions found over '''49''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
*** [[l_plantarum_wcfs1]]
+
* Category: [[manual]]
 +
** Source: [[manual-curation_from_orthology]]
 
== External links  ==
 
== External links  ==
* Reactome : REACT_R-HSA-379844
 
* MetaNetX (MNX) Equation : MNXR100643
 
* KEGG Reaction : R03655
 
* EC Number : 6.1.1.21
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Histidyl-tRNA synthetase}}
+
{{#set: common name=Isochorismate synthase}}
{{#set: gene associated=EF1971}}
+
{{#set: gene associated=EF0447}}
{{#set: in pathway=map00970}}
+
{{#set: in pathway=}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=orthology|manual}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|manual-curation_from_orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1}}
 

Latest revision as of 15:41, 21 March 2018

Reaction ICHORS_copy2

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Isochorismate synthase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Chorismate[c] => 1.0 Isochorismate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links