Difference between revisions of "HISTRS"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ADMDC ADMDC] == * direction: ** LEFT-TO-RIGHT * common name: ** Adenosylmethionine decarboxylase *...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/HISTRS HISTRS] == * direction: ** LEFT-TO-RIGHT * common name: ** Histidyl-tRNA synthetase * Synony...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/ADMDC ADMDC] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/HISTRS HISTRS] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Adenosylmethionine decarboxylase
+
** Histidyl-tRNA synthetase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[h]][c] '''+''' 1.0 [[amet]][c] '''=>''' 1.0 [[ametam]][c] '''+''' 1.0 [[co2]][c]
+
** 1.0 [[his__L]][c] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[trnahis]][c] '''=>''' 1.0 [[histrna]][c] '''+''' 1.0 [[ppi]][c] '''+''' 1.0 [[amp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H+[c] '''+''' 1.0 S-Adenosyl-L-methionine[c] '''=>''' 1.0 S-Adenosylmethioninamine[c] '''+''' 1.0 CO2 CO2[c]
+
** 1.0 L-Histidine[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 TRNA(His)[c] '''=>''' 1.0 L-Histidyl-tRNA(His)[c] '''+''' 1.0 Diphosphate[c] '''+''' 1.0 AMP C10H12N5O7P[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[EF1971]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
+
* [[map00970]]: [http://www.genome.jp/dbget-bin/www_bget?map00970 map00970]
−
** '''460''' reactions found over '''2349''' reactions in the full pathway
+
** '''23''' reactions found over '''49''' reactions in the full pathway
−
* [[map00270]]: [http://www.genome.jp/dbget-bin/www_bget?map00270 map00270]
+
−
** '''25''' reactions found over '''135''' reactions in the full pathway
+
−
* [[map00330]]: [http://www.genome.jp/dbget-bin/www_bget?map00330 map00330]
+
−
** '''22''' reactions found over '''149''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[gap-filling]]
+
* Category: [[orthology]]
−
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** Tool: [[meneco]]
+
*** Tool: [[pantograph]]
−
**** Comment: [[added for gapfilling]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* Reactome : REACT_R-HSA-379844
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15981 15981]
+
* MetaNetX (MNX) Equation : MNXR100643
−
* EC Number : 4.1.1.50
+
* KEGG Reaction : R03655
−
* MetaNetX (MNX) Equation : MNXR95455
+
* EC Number : 6.1.1.21
−
* KEGG Reaction : R00178
+
−
* BioCyc : META:SAMDECARB-RXN
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Adenosylmethionine decarboxylase}}
+
{{#set: common name=Histidyl-tRNA synthetase}}
−
{{#set: in pathway=map01100|map00270|map00330}}
+
{{#set: gene associated=EF1971}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: in pathway=map00970}}
−
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-l_plantarum_wcfs1}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:41, 21 March 2018

Reaction HISTRS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Histidyl-tRNA synthetase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Histidine[c] + 1.0 ATP C10H12N5O13P3[c] + 1.0 TRNA(His)[c] => 1.0 L-Histidyl-tRNA(His)[c] + 1.0 Diphosphate[c] + 1.0 AMP C10H12N5O7P[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • Reactome : REACT_R-HSA-379844
  • MetaNetX (MNX) Equation : MNXR100643
  • KEGG Reaction : R03655
  • EC Number : 6.1.1.21




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