Difference between revisions of "TPRDCOAS"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ICL ICL] == * direction: ** LEFT-TO-RIGHT * common name: ** Isocitrate lyase * Synonym(s): == Reac...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TPRDCOAS TPRDCOAS] == * direction: ** LEFT-TO-RIGHT * common name: ** Triphosphoribosyl-dephospho-C...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/ICL ICL] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/TPRDCOAS TPRDCOAS] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Isocitrate lyase
+
** Triphosphoribosyl-dephospho-CoA synthase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[icit]][c] '''=>''' 1.0 [[succ]][c] '''+''' 1.0 [[glx]][c]
+
** 1.0 [[atp]][c] '''+''' 1.0 [[dpcoa]][c] '''=>''' 1.0 [[ade]][c] '''+''' 1.0 [[2tpr3dpcoa]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Isocitrate[c] '''=>''' 1.0 Succinate[c] '''+''' 1.0 Glyoxylate[c]
+
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Dephospho-CoA[c] '''=>''' 1.0 Adenine[c] '''+''' 1.0 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[EF3315]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 
−
** '''50''' reactions found over '''220''' reactions in the full pathway
 
−
* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
 
−
** '''25''' reactions found over '''129''' reactions in the full pathway
 
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''218''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
−
** '''111''' reactions found over '''715''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[gap-filling]]:
+
* Category: [[orthology]]
−
** [[meneco]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[added for gapfilling]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13245 13245]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15117 15117]
−
* MetaNetX (MNX) Equation : MNXR100789
+
* BioCyc : META:2.7.8.25-RXN
−
* KEGG Reaction : R00479
+
* MetaNetX (MNX) Equation : MNXR104920
−
* EC Number : 4.1.3.1
+
* KEGG Reaction : R09675
 +
* EC Number : 2.4.2.52
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Isocitrate lyase}}
+
{{#set: common name=Triphosphoribosyl-dephospho-CoA synthase}}
−
{{#set: in pathway=map01200|map00630|map01110|map01100|map01120}}
+
{{#set: gene associated=EF3315}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:42, 21 March 2018

Reaction TPRDCOAS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Triphosphoribosyl-dephospho-CoA synthase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 Dephospho-CoA[c] => 1.0 Adenine[c] + 1.0 2'-(5-triphosphoribosyl)-3'-dephospho-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:2.7.8.25-RXN
  • MetaNetX (MNX) Equation : MNXR104920
  • KEGG Reaction : R09675
  • EC Number : 2.4.2.52




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