Difference between revisions of "FUMt2 2"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/LYSTRS LYSTRS] == * direction: ** LEFT-TO-RIGHT * common name: ** Lysyl-tRNA synthetase * Synonym(s...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/FUMt2_2 FUMt2_2] == * direction: ** LEFT-TO-RIGHT * common name: ** Fumarate transport via proton s...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/LYSTRS LYSTRS] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/FUMt2_2 FUMt2_2] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Lysyl-tRNA synthetase
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** Fumarate transport via proton symport (2 H)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[trnalys]][c] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[lys__L]][c] '''=>''' 1.0 [[amp]][c] '''+''' 1.0 [[ppi]][c] '''+''' 1.0 [[lystrna]][c]
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** 2.0 [[h]][e] '''+''' 1.0 [[fum]][e] '''=>''' 2.0 [[h]][c] '''+''' 1.0 [[fum]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 TRNA(Lys)[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 L-Lysine[c] '''=>''' 1.0 AMP C10H12N5O7P[c] '''+''' 1.0 Diphosphate[c] '''+''' 1.0 L-Lysine-tRNA (Lys)[c]
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** 2.0 H+[e] '''+''' 1.0 Fumarate[e] '''=>''' 2.0 H+[c] '''+''' 1.0 Fumarate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF0268]]
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* Gene: [[EF0387]]
** [[pantograph]]-[[l_plantarum_wcfs1]]
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** Source: [[manual-2_reaction_to_add_delete]]
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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== Pathways  ==
 
== Pathways  ==
* [[map00970]]: [http://www.genome.jp/dbget-bin/www_bget?map00970 map00970]
 
** '''23''' reactions found over '''49''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
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* Category: [[manual]]
** [[pantograph]]:
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** Source: [[manual-2_reaction_to_add_delete]]
*** [[e_coli_sstr_k12_substr_mg1655]]
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*** Comment: [[this was a reaction occurring in the perisplasm of e. coli]]
*** [[l_plantarum_wcfs1]]
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== External links  ==
 
== External links  ==
* Reactome : REACT_R-HSA-380008
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* RHEA:
* MetaNetX (MNX) Equation : MNXR101264
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29331 29331]
* KEGG Reaction : R03658
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* MetaNetX (MNX) Equation : MNXR99711
* EC Number : 6.1.1.6
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* BioCyc : META:TRANS-RXN-121B
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Lysyl-tRNA synthetase}}
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{{#set: common name=Fumarate transport via proton symport (2 H)}}
{{#set: gene associated=EF0268}}
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{{#set: gene associated=EF0387}}
{{#set: in pathway=map00970}}
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{{#set: in pathway=}}
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction category=manual}}
{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=manual-2_reaction_to_add_delete}}
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1}}
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{{#set: reconstruction comment=this was a reaction occurring in the perisplasm of e. coli}}

Latest revision as of 15:42, 21 March 2018

Reaction FUMt2_2

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Fumarate transport via proton symport (2 H)
  • Synonym(s):

Reaction Formula

  • With identifiers:
    • 2.0 h[e] + 1.0 fum[e] => 2.0 h[c] + 1.0 fum[c]
  • With common name(s):
    • 2.0 H+[e] + 1.0 Fumarate[e] => 2.0 H+[c] + 1.0 Fumarate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR99711
  • BioCyc : META:TRANS-RXN-121B