Difference between revisions of "OCMAT3 manual"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/XTSNH XTSNH] == * direction: ** LEFT-TO-RIGHT * common name: ** Xanthosine hydrolase * Synonym(s):...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/OCMAT3_manual OCMAT3_manual] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula ==...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/XTSNH XTSNH] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/OCMAT3_manual OCMAT3_manual] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** Xanthosine hydrolase
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[xtsn]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[xan]][c] '''+''' 1.0 [[rib__D]][c]
+
** 1.0 [[h]][c] '''+''' 1.0 [[toct2eACP]][c] '''+''' 1.0 [[nadh]][c] '''=>''' 1.0 [[nad]][c] '''+''' 1.0 [[octACP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Xanthosine[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Xanthine[c] '''+''' 1.0 D-Ribose[c]
+
**
−
 
+
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF2587]]
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* Gene: [[EF0282]]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
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** Source: [[manual-4_newreactions]]
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* [[EF1921]]
+
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
−
** '''97''' reactions found over '''298''' reactions in the full pathway
 
−
* [[map00760]]: [http://www.genome.jp/dbget-bin/www_bget?map00760 map00760]
 
−
** '''19''' reactions found over '''97''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[manual]]
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** [[pantograph]]:
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** Source: [[manual-4_newreactions]]
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*** [[e_coli_sstr_k12_substr_mg1655]]
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*** Comment: [[manual curation]]
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*** [[l_plantarum_wcfs1]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27994 27994]
 
−
* BioCyc : META:RXN0-363
 
−
* MetaNetX (MNX) Equation : MNXR105245
 
−
* KEGG Reaction : R02143
 
−
* EC Number : 3.2.2.1
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Xanthosine hydrolase}}
+
{{#set: gene associated=EF0282}}
−
{{#set: gene associated=EF2587|EF1921}}
+
{{#set: in pathway=}}
−
{{#set: in pathway=map01100|map00230|map00760}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=manual-4_newreactions}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction comment=manual curation}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1}}
+

Latest revision as of 15:42, 21 March 2018

Reaction OCMAT3_manual

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=OCMAT3_manual&oldid=11082"