Difference between revisions of "ALATA L2"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/RBP4E RBP4E] == * direction: ** REVERSIBLE * common name: ** L-ribulose-phosphate 4-epimerase * Syn...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ALATA_L2 ALATA_L2] == * direction: ** LEFT-TO-RIGHT * common name: ** Alanine transaminase * Synony...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/RBP4E RBP4E] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ALATA_L2 ALATA_L2] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** L-ribulose-phosphate 4-epimerase
+
** Alanine transaminase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[ru5p__L]][c] '''<=>''' 1.0 [[xu5p__D]][c]
+
** 1.0 [[pydx5p]][c] '''+''' 1.0 [[ala__L]][c] '''=>''' 1.0 [[pyr]][c] '''+''' 1.0 [[pyam5p]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 L-Ribulose 5-phosphate[c] '''<=>''' 1.0 D-Xylulose 5-phosphate[c]
+
** 1.0 Pyridoxal 5'-phosphate[c] '''+''' 1.0 L-Alanine[c] '''=>''' 1.0 Pyruvate[c] '''+''' 1.0 Pyridoxamine 5'-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF1131]]
+
* Gene: [[EF2550]]
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
* [[map00040]]: [http://www.genome.jp/dbget-bin/www_bget?map00040 map00040]
 
** '''15''' reactions found over '''54''' reactions in the full pathway
 
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
** '''104''' reactions found over '''715''' reactions in the full pathway
 
* [[map00053]]: [http://www.genome.jp/dbget-bin/www_bget?map00053 map00053]
 
** '''7''' reactions found over '''50''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
*** [[l_plantarum_wcfs1]]
+
*** [[b_subtilis_subsp_subtilis_str168]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22368 22368]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30023 30023]
* BioCyc : META:RIBULPEPIM-RXN
+
* MetaNetX (MNX) Equation : MNXR95699
* MetaNetX (MNX) Equation : MNXR103434
+
{{#set: direction=LEFT-TO-RIGHT}}
* KEGG Reaction : R05850
+
{{#set: common name=Alanine transaminase}}
* EC Number : 5.1.3.4
+
{{#set: gene associated=EF2550}}
{{#set: direction=REVERSIBLE}}
+
{{#set: in pathway=}}
{{#set: common name=L-ribulose-phosphate 4-epimerase}}
+
{{#set: gene associated=EF1131}}
+
{{#set: in pathway=map01100|map00040|map01120|map00053}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
 

Latest revision as of 16:43, 21 March 2018

Reaction ALATA_L2

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Alanine transaminase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Pyridoxal 5'-phosphate[c] + 1.0 L-Alanine[c] => 1.0 Pyruvate[c] + 1.0 Pyridoxamine 5'-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR95699