Difference between revisions of "RBP4E"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_pan4p ExchangeSeed_pan4p] == * direction: ** REVERSIBLE * Synonym(s): == Reaction For...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/RBP4E RBP4E] == * direction: ** REVERSIBLE * common name: ** L-ribulose-phosphate 4-epimerase * Syn...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/RBP4E RBP4E] == |
* direction: | * direction: | ||
** REVERSIBLE | ** REVERSIBLE | ||
| + | * common name: | ||
| + | ** L-ribulose-phosphate 4-epimerase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[ru5p__L]][c] '''<=>''' 1.0 [[xu5p__D]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 L-Ribulose 5-phosphate[c] '''<=>''' 1.0 D-Xylulose 5-phosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[EF1131]] | ||
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] | ||
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
== Pathways == | == Pathways == | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''460''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map00040]]: [http://www.genome.jp/dbget-bin/www_bget?map00040 map00040] | ||
| + | ** '''15''' reactions found over '''54''' reactions in the full pathway | ||
| + | * [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120] | ||
| + | ** '''104''' reactions found over '''715''' reactions in the full pathway | ||
| + | * [[map00053]]: [http://www.genome.jp/dbget-bin/www_bget?map00053 map00053] | ||
| + | ** '''7''' reactions found over '''50''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * Category: [[ | + | * Category: [[orthology]] |
| − | ** Source: [[ | + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] |
| − | *** | + | *** Tool: [[pantograph]] |
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22368 22368] | ||
| + | * BioCyc : META:RIBULPEPIM-RXN | ||
| + | * MetaNetX (MNX) Equation : MNXR103434 | ||
| + | * KEGG Reaction : R05850 | ||
| + | * EC Number : 5.1.3.4 | ||
{{#set: direction=REVERSIBLE}} | {{#set: direction=REVERSIBLE}} | ||
| − | {{#set: in pathway=}} | + | {{#set: common name=L-ribulose-phosphate 4-epimerase}} |
| − | {{#set: reconstruction category= | + | {{#set: gene associated=EF1131}} |
| − | {{#set: reconstruction source= | + | {{#set: in pathway=map01100|map00040|map01120|map00053}} |
| − | {{#set: reconstruction | + | {{#set: reconstruction category=orthology}} |
| + | {{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 15:43, 21 March 2018
Contents
Reaction RBP4E
- direction:
- REVERSIBLE
- common name:
- L-ribulose-phosphate 4-epimerase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 L-Ribulose 5-phosphate[c] <=> 1.0 D-Xylulose 5-phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: EF1131
Pathways
- map01100: map01100
- 460 reactions found over 2349 reactions in the full pathway
- map00040: map00040
- 15 reactions found over 54 reactions in the full pathway
- map01120: map01120
- 104 reactions found over 715 reactions in the full pathway
- map00053: map00053
- 7 reactions found over 50 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-e_coli_sstr_k12_substr_mg1655
- Tool: pantograph
- Source: orthology-b_subtilis_subsp_subtilis_str168
- Tool: pantograph
- Source: orthology-l_plantarum_wcfs1
- Tool: pantograph
- Source: orthology-e_coli_sstr_k12_substr_mg1655
External links
- RHEA:
- BioCyc : META:RIBULPEPIM-RXN
- MetaNetX (MNX) Equation : MNXR103434
- KEGG Reaction : R05850
- EC Number : 5.1.3.4
