Difference between revisions of "SPMDOX"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NOX NOX] == * direction: ** LEFT-TO-RIGHT * common name: ** NADH oxidase * Synonym(s): == Reaction...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SPMDOX SPMDOX] == * direction: ** LEFT-TO-RIGHT * common name: ** Spermidine:(acceptor) oxidoreduct...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/NOX NOX] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/SPMDOX SPMDOX] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** NADH oxidase
+
** Spermidine:(acceptor) oxidoreductase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[h]][c] '''+''' 1.0 [[o2]][c] '''+''' 1.0 [[nadh]][c] '''=>''' 1.0 [[h2o2]][c] '''+''' 1.0 [[nad]][c]
+
** 1.0 [[o2]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[spmd]][c] '''=>''' 1.0 [[4abutn]][c] '''+''' 1.0 [[h2o2]][c] '''+''' 1.0 [[13dampp]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 H+[c] '''+''' 1.0 O2 O2[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''=>''' 1.0 Hydrogen peroxide[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c]
+
** 1.0 O2 O2[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 Spermidine[c] '''=>''' 1.0 4-Aminobutanal[c] '''+''' 1.0 Hydrogen peroxide[c] '''+''' 1.0 1 3 Diaminopropane C3H12N2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[EF1586]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
* [[EF2989]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[orthology]]
+
* Category: [[gap-filling]]
** Source: [[orthology-l_plantarum_wcfs1]]
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
*** Tool: [[pantograph]]
+
*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
* RHEA:
+
* MetaNetX (MNX) Equation : MNXR104481
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11264 11264]
+
* BioCyc : META:RXN-14691
+
* MetaNetX (MNX) Equation : MNXR102010
+
* KEGG Reaction : R07171
+
* EC Number : 1.6.3.1
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=NADH oxidase}}
+
{{#set: common name=Spermidine:(acceptor) oxidoreductase}}
{{#set: gene associated=EF1586|EF2989}}
+
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=gap-filling}}
{{#set: reconstruction source=orthology-l_plantarum_wcfs1}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=meneco}}
 +
{{#set: reconstruction comment=added for gapfilling}}

Latest revision as of 16:44, 21 March 2018

Reaction SPMDOX

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Spermidine:(acceptor) oxidoreductase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 O2 O2[c] + 1.0 H2O H2O[c] + 1.0 Spermidine[c] => 1.0 4-Aminobutanal[c] + 1.0 Hydrogen peroxide[c] + 1.0 1 3 Diaminopropane C3H12N2[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR104481