Difference between revisions of "SERD D"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/3OAR120 3OAR120] == * direction: ** REVERSIBLE * common name: ** 3-oxoacyl-[acyl-carrier-protein] r...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SERD_D SERD_D] == * direction: ** LEFT-TO-RIGHT * common name: ** D-serine deaminase * Synonym(s):...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/SERD_D SERD_D] == |
* direction: | * direction: | ||
| − | ** | + | ** LEFT-TO-RIGHT |
* common name: | * common name: | ||
| − | ** | + | ** D-serine deaminase |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[ser__D]][c] '''=>''' 1.0 [[pyr]][c] '''+''' 1.0 [[nh4]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 D-Serine[c] '''=>''' 1.0 Pyruvate[c] '''+''' 1.0 Ammonium[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[EF2579]] |
| − | ** [[ | + | ** Source: [[orthology-l_plantarum_wcfs1]] |
| − | + | ||
== Pathways == | == Pathways == | ||
| − | * [[ | + | * [[map00260]]: [http://www.genome.jp/dbget-bin/www_bget?map00260 map00260] |
| − | ** ''' | + | ** '''23''' reactions found over '''133''' reactions in the full pathway |
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]] | + | * Category: [[orthology]] |
| − | ** | + | ** Source: [[orthology-l_plantarum_wcfs1]] |
| − | + | *** Tool: [[pantograph]] | |
| − | *** [[ | + | |
== External links == | == External links == | ||
| − | * MetaNetX (MNX) Equation : | + | * RHEA: |
| − | * KEGG Reaction : | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13977 13977] |
| − | * EC Number : | + | * BioCyc : META:DSERDEAM-RXN |
| − | {{#set: direction= | + | * MetaNetX (MNX) Equation : MNXR104338 |
| − | {{#set: common name= | + | * KEGG Reaction : R00221 |
| − | {{#set: gene associated= | + | * EC Number : 4.3.1.18 |
| − | {{#set: in pathway= | + | {{#set: direction=LEFT-TO-RIGHT}} |
| + | {{#set: common name=D-serine deaminase}} | ||
| + | {{#set: gene associated=EF2579}} | ||
| + | {{#set: in pathway=map00260}} | ||
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-l_plantarum_wcfs1}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
| − | |||
Latest revision as of 16:45, 21 March 2018
Contents
Reaction SERD_D
- direction:
- LEFT-TO-RIGHT
- common name:
- D-serine deaminase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 D-Serine[c] => 1.0 Pyruvate[c] + 1.0 Ammonium[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: EF2579
- Source: orthology-l_plantarum_wcfs1
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-l_plantarum_wcfs1
- Tool: pantograph
- Source: orthology-l_plantarum_wcfs1
External links
- RHEA:
- BioCyc : META:DSERDEAM-RXN
- MetaNetX (MNX) Equation : MNXR104338
- KEGG Reaction : R00221
- EC Number : 4.3.1.18
