Difference between revisions of "DPMVD"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/BMOCOS BMOCOS] == * direction: ** LEFT-TO-RIGHT * common name: ** Bis-molybdenum cofactor synthase...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DPMVD DPMVD] == * direction: ** LEFT-TO-RIGHT * common name: ** Diphosphomevalonate decarboxylase *...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/BMOCOS BMOCOS] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/DPMVD DPMVD] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Bis-molybdenum cofactor synthase
+
** Diphosphomevalonate decarboxylase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[mptamp]][c] '''+''' 1.0 [[moco]][c] '''=>''' 1.0 [[amp]][c] '''+''' 1.0 [[cu2]][c] '''+''' 1.0 [[bmoco]][c]
+
** 1.0 [[atp]][c] '''+''' 1.0 [[5dpmev]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[co2]][c] '''+''' 1.0 [[ipdp]][c] '''+''' 1.0 [[pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Adenylated molybdopterin[c] '''+''' 1.0 Molybdenum cofactor[c] '''=>''' 1.0 AMP C10H12N5O7P[c] '''+''' 1.0 Copper[c] '''+''' 1.0 Bis-molybdenum cofactor[c]
+
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 R  5 Diphosphomevalonate C6H10O10P2[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 CO2 CO2[c] '''+''' 1.0 Isopentenyl diphosphate[c] '''+''' 1.0 Phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1391]]
+
* Gene: [[EF0903]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''135''' reactions found over '''694''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00900]]: [http://www.genome.jp/dbget-bin/www_bget?map00900 map00900]
 +
** '''14''' reactions found over '''67''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-l_plantarum_wcfs1]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR96314
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23732 23732]
 +
* BioCyc : META:DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN
 +
* MetaNetX (MNX) Equation : MNXR97776
 +
* KEGG Reaction : R01121
 +
* EC Number : 4.1.1.33
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Bis-molybdenum cofactor synthase}}
+
{{#set: common name=Diphosphomevalonate decarboxylase}}
−
{{#set: gene associated=EF1391}}
+
{{#set: gene associated=EF0903}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=map01100|map01130|map01110|map00900}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}
 

Latest revision as of 15:45, 21 March 2018

Reaction DPMVD

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Diphosphomevalonate decarboxylase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 R 5 Diphosphomevalonate C6H10O10P2[c] => 1.0 ADP C10H12N5O10P2[c] + 1.0 CO2 CO2[c] + 1.0 Isopentenyl diphosphate[c] + 1.0 Phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN
  • MetaNetX (MNX) Equation : MNXR97776
  • KEGG Reaction : R01121
  • EC Number : 4.1.1.33




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