Difference between revisions of "DMATT"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NMNAT NMNAT] == * direction: ** LEFT-TO-RIGHT * common name: ** Nicotinamide-nucleotide adenylyltra...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DMATT DMATT] == * direction: ** LEFT-TO-RIGHT * common name: ** Dimethylallyltranstransferase * Syn...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/NMNAT NMNAT] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/DMATT DMATT] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Nicotinamide-nucleotide adenylyltransferase
+
** Dimethylallyltranstransferase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[nmn]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[nad]][c] '''+''' 1.0 [[ppi]][c]
+
** 1.0 [[ipdp]][c] '''+''' 1.0 [[dmpp]][c] '''=>''' 1.0 [[grdp]][c] '''+''' 1.0 [[ppi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 NMN C11H14N2O8P[c] '''+''' 1.0 H+[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 Diphosphate[c]
+
** 1.0 Isopentenyl diphosphate[c] '''+''' 1.0 Dimethylallyl diphosphate[c] '''=>''' 1.0 Geranyl diphosphate[c] '''+''' 1.0 Diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF2871]]
+
* Gene: [[EF0981]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00760]]: [http://www.genome.jp/dbget-bin/www_bget?map00760 map00760]
+
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
−
** '''25''' reactions found over '''97''' reactions in the full pathway
+
** '''135''' reactions found over '''694''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00900]]: [http://www.genome.jp/dbget-bin/www_bget?map00900 map00900]
 +
** '''14''' reactions found over '''67''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* EC Number : 2.7.7.1
+
* EC Number : 2.5.1.1
−
* BioCyc : META:2.7.7.1-RXN
+
* BioCyc : META:GPPSYN-RXN
−
* MetaNetX (MNX) Equation : MNXR95841
+
* MetaNetX (MNX) Equation : MNXR97512
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21360 21360]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22408 22408]
−
* Reactome : REACT_R-ATH-8939959
+
* Reactome : REACT_R-ATH-191322
−
* KEGG Reaction : R00137
+
* KEGG Reaction : R01658
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Nicotinamide-nucleotide adenylyltransferase}}
+
{{#set: common name=Dimethylallyltranstransferase}}
−
{{#set: gene associated=EF2871}}
+
{{#set: gene associated=EF0981}}
−
{{#set: in pathway=map01100|map00760}}
+
{{#set: in pathway=map01100|map01130|map01110|map00900}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|b_subtilis_subsp_subtilis_str168}}
 

Latest revision as of 15:45, 21 March 2018

Reaction DMATT

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Dimethylallyltranstransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Isopentenyl diphosphate[c] + 1.0 Dimethylallyl diphosphate[c] => 1.0 Geranyl diphosphate[c] + 1.0 Diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 2.5.1.1
  • BioCyc : META:GPPSYN-RXN
  • MetaNetX (MNX) Equation : MNXR97512
  • RHEA:
  • Reactome : REACT_R-ATH-191322
  • KEGG Reaction : R01658




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